Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424342
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Entry
139424342 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139424342
03037 Cilium and associated proteins [BR:
ocla03037
]
139424342
Transporters [BR:
ocla02000
]
Other transporters
Pores ion channels [TC:
1
]
139424342
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139424342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
139424342
NCBI-ProteinID:
XP_071032178
LinkDB
All DBs
Position
13:complement(8812095..8839720)
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AA seq
859 aa
AA seq
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MVDRRTDKENGTDSREERREREMAHSVNFDLTADHMEAGLESPADEEGVHDSFNQLIEDQ
RQEALELQELQRDLDEEERDSVAYLSSPGQEIWRGSPGRSEEEGGGQLDPLLEERWSSAT
LKVLSSMPSRTIGRSRGAIISQYYNRTMKLRRRRQSRPSIKDFSRSARPSIRGYGMETDC
METEGVDEEGRKRDQLVNNLQNLSLSDRVRMLRAMPLSVAEKSELRRLADRKGRRSNHSQ
IPCCSQLKYHIIIALRHSWYSCLSFLHSLQLWQVALKRVSGRFGTGVLSYFLFVKTLLFF
NIFLFLVTGLLLAVPQAVHPPTLTQEHEAFSGLELLTGGGYFSDSVMYYGYYSNSTLSKD
CRVTSSSMEQQPSPSVSRRTMETDCGVKPSYNMPLAYFFTIGLAFFITCIILVYSMSKSF
GQSFRIDKSHGILAMKVFCSWDFKVIKKTSVKLRSENICIQLRELLEETSRKHVQKTACQ
RIGRVLVHVLAWFICIGSTVACVLALYYFSEYMHKDLQYRSRIPTKDPLLKEASLLALPV
VVSLINLLLPGIFNATAWMEEYDSPSVNTYIAISRNLMLKVSVLVVLCFHWLGRIASDPH
SIGLQCWESFVGQELYRFLLMDFIFTILDTFFGEFLWRLFSQRVLKRKRKPVFDISRNVL
ELIYGQTLAWLGVLFTPLLPAVQIIKLLLLFYMKQTSVMMNCQSPRKPYRASQMSTIFIT
LLCCPSFLGAAVCVSYTMWSIRPSESCGPFRSLSTMFQSGKLWVKELETHNPNLAWLAWA
HSYIVENPLFLFLAAGIFLIVIYFNTQVVDGQRKIISLLQEQIENEGEDKKFLITRLQAI
HQQKRPLSPRRLTSQDSNC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggttgacagacggacggataaagagaacgggacagacagcagagaggagagacgggag
agagagatggctcacagtgtcaactttgacctgactgctgatcacatggaggctggcctg
gagagcccagcggatgaagagggggtccatgactcctttaaccagctgatagaggatcag
agacaggaagccttggagctgcaggaactacagagagacctggacgaggaggaacgagac
agtgtagcgtacctgtccagccctggtcaggagatatggcgtgggagcccggggaggagt
gaggaggaaggggggggacagttagacccccttctagaggaacgctggtcctccgccacc
ctcaaagtcctctcctccatgcccagccgcaccatcggtcgtagtcgaggtgctatcatc
tctcagtactataacaggaccatgaagttgagaagacgcagacagagcaggccttccata
aaggacttttcccgctccgcacggcccagtatccgtggttacggcatggagacagactgc
atggagaccgagggcgtggatgaggaggggcgtaagcgtgaccaactggtcaacaacctt
cagaacctctctctgagtgaccgggtcaggatgctgcgagccatgcctctctctgtggca
gagaagagtgaactaaggaggttggctgacaggaagggtcgacgctccaatcacagtcag
atcccctgttgcagccagctcaagtatcacatcatcatcgctctgagacatagctggtac
agttgtctctccttcctccactccctacagctgtggcaggtggcgctgaagagggtgagc
ggtcgtttcggcaccggcgtcctctcttacttcctgttcgtcaagaccctcctcttcttc
aacatcttcctgttcctggtcacgggtttgttgctggccgtgccccaggcagtacacccc
cccacattaacccaggaacacgaagccttctctgggctggagctgctcactggagggggt
tatttctcagactcagtgatgtactatggttactatagtaactctaccctgtctaaggac
tgtagagtcactagtagcagtatggagcagcagcccagtccctctgtatctagaaggaca
atggaaacagactgtggagtgaagccgtcctacaacatgcccctagcatacttcttcacc
ataggactggctttcttcatcacctgcatcatcctcgtctacagcatgtccaagtcgttt
ggtcagagtttccgtatcgacaagtcacatggtatcctggcgatgaaggtgttctgttcc
tgggactttaaagtcatcaagaaaacctctgtcaaactccggtctgaaaacatctgcatt
caactcagggagttgttagaggagacgagtcgtaagcatgtccagaagactgcgtgtcag
agaataggacgtgtgctggtacatgttctggcctggttcatctgtatcggcagtacagtg
gcctgtgttctagctctctactacttctctgagtacatgcacaaggacctccagtacaga
tctcgtattcccactaaggaccctctcctgaaggaagccagtctgttggccctgccagtc
gtagtgtctctcatcaacctcctgctccctggcatcttcaacgctactgcctggatggag
gagtacgactcgcccagcgtaaacacatacattgccatcagcaggaacctgatgttgaaa
gtgagcgtgctggtagtgctgtgcttccattggctgggccggatcgcttctgacccccac
agcatcggcctgcagtgctgggagagttttgtaggacaagagctgtaccgcttcctcctc
atggacttcatctttaccatactggacaccttctttggagagttcctctggaggttgttt
tctcagagggtgttgaagaggaaaagaaagcctgtgtttgacatctccaggaacgtgttg
gaactcatctacggacagacactggcctggttgggggtgttgttcactcctctgcttcct
gctgtacagatcatcaaactactgcttctcttctacatgaagcagactagtgtgatgatg
aactgccagtctcctaggaagccctacagggccagtcagatgagcaccatcttcatcact
ctcctctgctgcccttccttcctgggggctgctgtttgtgtcagctacactatgtggagt
atccgtccgtctgagtcatgcggtccgttccggagcctgtccactatgttccagtcaggg
aagctgtgggtgaaggagttggagacacacaaccctaacctggcttggttagcctgggct
cacagctacatagtggagaaccctctgtttctgttcctcgctgctgggatcttcctgata
gtgatttacttcaacacccaggtggtggatggacagaggaagattatcagtctgctgcag
gagcaaatagaaaacgagggggaggataagaagttcctgatcactcgtctccaggccatc
caccagcagaaacgacccctctcccctcgcagactcaccagtcaggattccaactgttag
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