Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424399
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Entry
139424399 CDS
T10872
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139424399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139424399
04090 CD molecules [BR:
ocla04090
]
139424399
04091 Lectins [BR:
ocla04091
]
139424399
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SIGLEC family
139424399
CD molecules [BR:
ocla04090
]
Proteins
139424399
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139424399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
Ig_CD22
ig
V-set
I-set
Ig_5
Ig_4
PKD_3
ICAM_N
PKD
SIT
SpoIIIAH
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
139424399
NCBI-ProteinID:
XP_071032274
LinkDB
All DBs
Position
13:10451410..10484445
Genome browser
AA seq
791 aa
AA seq
DB search
MALRTAGSVLVVFLWSVAVVLGQDGWSVTYTTQSICTFKESTVELSCSYTYPSGTVTTAF
WYTESGTGKEPEDLGQDPEYAGRLEYHEDKKNGHTLRITDLRESDSAEYKFRFITDQTGG
KYIGSPGVTLSVTGIQVKVTGGHQDKTLTCSTTCTLTDNPTYIWYKNGHKVKEDTSSLYS
DSFSDADSYSCAVKGREDLHSPAVCQKCWSVTYTHQNICALKGSTVNISCSYTYPSNHEI
KTAFWFTKWSDKDAEDLSSVPGYEGHIEYLGDKESDCTLRITDLRLRDSAGYMFRFITSG
EKFSGSPVSLTVTDLQVKVTTTLLSTTLTCSTTCTLTGNPTYIWYRNSKIVQEASSPSYS
FYFKTEDSFYCAVKGIKSPAVSVEGHSYFHVTYTYQRICTLNGSSVDISCSYTYPSGHTV
SETIWYKKGKLNEAPQILSPGYGGRVEYLGNMQSDSILRITDLREEDSAEYKIRFRTDKT
TWEPTIPGTTLTVTGLQVKVTPPTVTEGQKVTLTCSTTCTLGDNPTYIWYKNGHVTNQST
SLFLNPVSSEDAGRYSCSVEGHEDLPSAEETLTVRYGPKNTSVSVSPSGEIVEGSSVTLT
CSSDANPPVDKYTWYKKNVASPKASGQSYSITNIISEDRGEYYCEAQNGKGSMNSTALMI
IVAGKPTSFMTAAVGIIVVVLVLILCLSGFMWFRKKASKSTSDTRDTSENVQGDSSPVYD
NISSMAMTSTAAQTADTDNQDYVHYASIHFSGSKNQEVPLYSTVQLPQPQIQDEDVQYAA
VKFSRPSAATR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggccttgagaacagcaggaagtgtgttggtggtctttctctggtctgtagcagtggta
ctgggtcaggatggctggagtgtgacttacaccactcagagtatctgtaccttcaaggag
tcaacagtagagctgtcctgctcttacacatatcccagtggtacagtcacaacagccttc
tggtacactgaatcggggactggtaaagaacctgaagatctaggtcaggacccagagtat
gcaggtcgtctggagtatcatgaggataagaagaatggtcacacactgagaatcacagac
ttgagagagagtgactctgctgagtacaagttcagatttataacagatcagactggaggg
aaatatattggcagtcctggagtcactctgtctgtcacaggtattcaggtgaaggtgact
ggtggacatcaggataagacactgacctgtagcaccacctgtactctgactgacaacccc
acctacatctggtacaagaacggacacaaagtaaaggaggacacttccagcctgtactca
gactcctttagtgatgcagacagttactcctgtgctgtaaaaggccgtgaggaccttcac
tctcctgcagtgtgtcagaagtgttggagtgtgacttacacccatcagaatatctgtgct
ttgaaggggtcaacagtgaacatatcctgctcttacacatatcccagtaatcatgagatc
aaaacagctttctggtttactaaatggtctgataaggatgctgaagatctgagctcagtg
ccagggtatgaaggtcatatagagtaccttggggataaggagagtgactgcaccctgaga
atcacagatctgagattgcgtgactctgctgggtacatgttcagattcataacatctgga
gaaaagttctctggctcacctgtctccctgactgtcacagacctgcaggtgaaggtgacc
actacattgttgtcaacgacactgacctgtagcaccacctgtactctgactggtaacccc
acctacatttggtacaggaacagtaagattgtacaagaggcctcctctccctcatactca
ttctactttaaaactgaagacagcttctactgtgctgtaaaaggcatcaaatctcctgca
gtgtctgttgagggtcacagttatttccacgtgacttacacctatcagaggatctgtacc
ttgaatgggtcatcagtggacatatcctgttcttatacttatcccagtggtcatacagtc
tctgaaacaatctggtataaaaaaggaaaacttaatgaggcgcctcaaatcctgagcccg
gggtatggaggtcgtgtggagtaccttggaaatatgcagagtgactccatcctgagaatc
acagacctgagagaggaggactcagctgagtataagattagattcagaacagataagaca
acctgggagcccaccatccctggaacaactctgactgtcacaggtctgcaggtgaaggtg
actcctcccactgtgacagagggacagaaggtgacactgacctgtagcaccacctgtact
ctgggtgacaaccccacctacatctggtacaagaatggacatgtaaccaaccaatctacc
agtctgttcctaaacccagtcagcagtgaggatgcaggcagatactcctgttctgtagaa
ggacatgaggatctcccctctgctgaagagactctcactgtcagatatggcccaaagaac
acctcagtgtcagtcagtccctctggtgaaatagtggagggcagttcagtgactctgacc
tgcagcagtgatgccaacccacctgtggacaaatacacctggtacaagaagaacgtagcc
tcaccaaaagcatcaggacagagttacagcatcactaacatcatctctgaggacagaggg
gaatattactgtgaggcccagaatggaaaaggatctatgaactctacagctctgatgatc
attgtagcagggaaaccaacctcctttatgactgcagctgtaggaatcatagtggttgtt
ctggttctcatcctctgtctctctggcttcatgtggttcaggaagaaggcctccaaatcc
acctctgacacaagagacacatcagagaatgtacagggagactctagtccagtgtatgac
aacatctcaagcatggccatgacctctactgcagcacagacagctgacacagacaaccag
gattatgttcactatgccagcatccacttctctggctccaaaaaccaggaagtgcctcta
tactccaccgtccagctgcctcagccccagattcaggacgaggatgtccagtatgctgct
gtgaaattcagccgccccagtgctgccacccggtga
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