Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424445
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Entry
139424445 CDS
T10872
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
Motif
Other DBs
NCBI-GeneID:
139424445
NCBI-ProteinID:
XP_071032367
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All DBs
Position
13:14222186..14248231
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AA seq
585 aa
AA seq
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MSSTLGNKDKDWKEKDLKGGPTGGKEREKEAKALAGLGGKDCGKDPKAKGKDAKEGKKDA
GSASPAVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPT
SIKELTQLAELYLYSNKLQSLPSEVGCLSGLVTLALSENSLTSLPESLDSLKKLRMLDLR
HNKLREIPAVVYRVTSLTTLYLRFNRITAVERDIRNLAKLTMLSIRENKIKQLPAEIGEL
CNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLS
AIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTI
YSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI
PEDICGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV
LTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFEL
ALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggtaacaaagacaaagactggaaagagaaggacctgaaaggaggt
ccgacaggagggaaagaaagggaaaaagaggccaaggctctggctggtttaggcggcaaa
gattgcggcaaggatcccaaggccaaagggaaagacgccaaagaaggaaagaaggatgca
ggttccgcgtcgcctgccgtcgccttctccgtggacaacacgataaagaggcccaacccg
gcgccggggacacgcaagaagtccagcaacgccgaggtgatcaaagagctcaacaagtgc
cgtgaggagaactccatgcgtctggacctgtccaagcgttccatccacatgttacccacc
tccatcaaggaactcacccagctggcagagctctacctgtacagcaacaagctccagagc
ctcccctcagaagtgggctgcctgtctggcctagtcaccttagccctgagtgagaactct
ctaaccagcctcccagagtccttggactccctgaagaagttgaggatgctggacctgagg
cataacaaactgagggagataccggcggtggtttaccgggtgacgtcgctgaccacactg
tacctgaggttcaaccggatcacggcggtagagagggacatccggaacctggcgaagttg
accatgctcagcatccgtgagaacaagatcaaacagctgcctgccgagataggggagctc
tgtaacctcatcaccctggacgtagcccataaccagctggaacatctacccaaggagatc
ggcaactgcacccagatcaccaacctggacctacagcacaacgagctactggacctacca
gaaactataggtaacttggcaagcataaaccgcttgggtctgcggtacaaccggttgtca
gccatccccagatcgctagccaagtgcagagaactggaagagctcaacctagaaaacaac
aacatctccgtgttaccagaaggtctcctgtctagtctggtgaatctgaccagtctaacc
ctggcgaggaactgtttccagtcctacccggtgggaggaccctcccagttctccaccatc
tactctctcaacatggagcacaaccgcatcaacaagatcccctttggaatcttctccagg
gccaaagtcctcagcaaactcaacatgaaggacaaccagttgacgtctctgcctctagac
tttggcacgtggaccagtatggtggagctcaacctggccaccaatcagttgacaaagatc
cctgaggacatctgcggtctcgtttcgcttgaggtcttgatattgtccaacaatcttctc
aagaagttgccacatggtattggcaacctgaggaaactacgggagctcgacttggaggag
aacaagctggaatcgctcccgaatgaaatcgcttacctgaaagatttacagaaactagtg
ttgaccaataatcagctgaccacgttgccccgtgggatcggtcacctcaccaacctgacc
cacctgggtctgggagagaacctgctgcagcacctgccagaggagatcggtacactggag
aacttggaggagctgtacctcaatgacaaccccaacctgcacagcctcccgtttgagctg
gccctgtgcagcaagctgtccatcatgagcatcgagaactgtcctctcagccatctgccc
ccgcagatcgtcgccgggggcccctccttcattatccagttcctcaagatgcaggggccc
taccgggccatggtctga
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