Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424446
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Entry
139424446 CDS
T10872
Name
(RefSeq) transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139424446
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139424446
Chromatin remodeling factors
BAF complex
139424446
PBAF complex
139424446
GBAF(ncBAF) complex
139424446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139424446
NCBI-ProteinID:
XP_071032368
LinkDB
All DBs
Position
13:14338310..14367882
Genome browser
AA seq
1803 aa
AA seq
DB search
MSTPDPPIGGTPRQGPSPGPGPSPGAMLGPSPGPSPGGSSHSMMGPSPGPPSSGHPLPQP
GPSGYSQENMHTLHKPLEGMERTTMERTAMERTAMERTGMERTAMERSAMERSAMERSTM
ERTAMERNAMERTAMERTAMERTAMERTGMERTTLERTAMERTAMERTAMERTGMERAGM
ERTGMERTGMERTGMHEKGMSEESRFAQMKGMPMRQGGHSGMGPPPSPMDQHSQGYHSPL
GGSDHSSPVPSNGPPSGPLQPSSAGPNPSDTSSNPDSQTLGGQNQQQNRPGGPQQSGSGP
GPHGPSPGPTTPGGPGGGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPM
GCSPGMQGQGPGQGGLGQPMPSLAPGGPGGVGPGPGGPMGQGYSRAHGMMGPNMPPPGPS
GPTGMQGQNPNGPPKSWSEGPMVNAAAPSNAPQKLIPPQPTGRPSPAPPSIPPAASPVMP
PQTQSPGQPVQPSPMVPHHAKQNRITPIQKPHGLDPVEILQEREYRLQARITHRIAELEN
LPGSLAGDLRTKATIELKALQLLNFQRQLRQEVVVCMRRDTALETALDAKAYKRSKRQSL
REARITEKLEKQQKIEQERKRRQKHQEYLSIILAHAKDFKEYHRSITAKIQKATKAVATY
HANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTEL
VRAHKLVQALKEKKKKRKKKKKLENAEGQTPVLGPDGEPLDETSQMSDLPVKVIHVESGN
ILTGADAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSEEEEEEEEEPQPAVPPVVVLPVLV
GLEEKKKKIPDPDSEEVSEVDVRHIIEHAKQDVDDEYNSAEAAFARGLQSYYAVAHAVTE
RVEKQSTILINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMENK
RVNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPQARRAFIPQLRSGKFNVLLTTY
EYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPE
LWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRL
KKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIM
QLRKICNHPYMFQQIEESFSEHLGFSGGIVSGLDLYRASGKFEVLDRILPKLRATNHKVL
LFCQMTSLMTIMEDYFAYRNFKHLRLDGTTKAEDRGMLLKAFNDPASQYFIFLLSTRAGG
LGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQLNEVRVLRLCTVNSVEEKILAAAKY
KLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVGAPGGVWKSGGSWEEDEVPDD
ETVNQMIARSEEEFDHFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTC
EEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRHKKTTRKRKRDRDD
LPGPSSSSSGGRRSRDKDEDGKRQKKRGRPPAEKLSPNPPALTKKMKKIVDAVIKYKDSS
NGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYRSLGDLERDVMLLFQNA
QTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEDSEGEDSEEEEEDLDEGSESECESSLKK
GTRSVKVKIRLGRREKSSDRGKGRRRLGRTRAKPVVSDDDTEEEQEEVRGEEERSPSGTD
EES
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagaccctcccattgggggtacccctcgacagggtccttccccaggcccg
gggccctctcctggggcaatgcttggccccagccctggtccttctccaggggggtcctct
cacagcatgatggggcccagcccagggcctccatcttcaggtcaccccctgcctcagcct
gggccctctggatactcccaggagaacatgcacactctgcacaaaccactggaaggtatg
gagagaactaccatggagaggactgccatggagaggactgccatggagaggactggaatg
gagaggactgccatggagaggtctgccatggagagaagtgccatggagagaagtaccatg
gagaggactgccatggagagaaatgccatggagaggactgccatggagagaactgccatg
gagaggactgccatggagaggactggtatggagaggactaccttggagaggactgccatg
gagaggactgcaatggagaggactgccatggagaggactggtatggagagggctggtatg
gagagaactggtatggaaaggactggtatggagagaactggtatgcatgagaagggcatg
agtgaggagtcccgctttgcccagatgaagggcatgcccatgagacagggagggcacagt
ggcatgggccctcctcccagccccatggaccaacactctcaaggctaccactccccactc
ggcggctctgaccactccagccccgtcccttccaacgggcccccctctggccctctccaa
ccctctagcgctggcccaaatccctcagacacctcctccaacccagactcccaaaccctg
gggggccagaaccagcagcagaaccggcccggtgggccccagcaaagtggctccggccct
ggccctcatggccccagccctggccccaccacccctggtggccccggaggaggccctact
cctttcaaccagaaccagcttcaccagctgcgggcccagatcatggcctataagatgctg
gccagggggcagccactaccggaccatctccagatggctgtccaggggaagaggcccatg
gggtgcagcccagggatgcagggtcaagggccagggcaggggggactggggcagcccatg
cccagcctggctcctggaggtcctggaggtgtgggaccaggaccaggaggacccatgggc
cagggctacagcagagctcacgggatgatgggacccaacatgccccctccaggcccctct
ggtccaaccggcatgcagggacagaaccccaacggaccccccaagtcctggtctgaaggt
ccgatggtaaacgccgccgccccctctaacgccccccagaagttgatccctccccagccg
acgggccgtccctcccccgctccaccctccataccccctgcggcctccccggtcatgccc
ccccagacccagtcccctgggcagccggtccagccctcacccatggtgccccaccatgcc
aagcagaaccgcattacccccatccagaaaccccacggactcgacccggtggaaatactg
caggagagggagtacagactgcaggctcgtatcacccatcgtatagctgagttggagaac
ctccctggctctctggctggagacctgaggaccaaggccaccatcgaactcaaggccctc
cagctgctcaacttccagagacagctgcgccaggaggtagtggtgtgtatgcgtagggac
accgctctggagacagctctggatgcgaaggcctacaagaggagcaagcgccagtcccta
cgagaggctcgcatcacagagaaactggagaaacagcagaagatcgaacaggagcgtaaa
cgtcgacagaaacaccaggagtatctgagcattatcctggcccacgccaaagactttaag
gagtaccaccgctctatcacagctaagatccagaaagccaccaaggccgtggccacatac
cacgccaacacagagcgcgagcagaagaaggagaacgagcgcatcgagaaggagaggatg
aggaggctgatggctgaggatgaggagggctaccgtaaactgattgaccagaagaaggac
aagcgtctggcctacctgctgcagcagacggatgagtacgtggccaacctcactgagttg
gtacgggctcacaagctggtacaggccctcaaagagaagaagaagaagaggaagaagaag
aagaagctggagaacgctgagggtcagactcctgtactgggacctgatggagaacctcta
gatgagacgtcccagatgagtgacctaccagtgaaggtgatccacgtggaaagtggtaac
atcctgacaggggcggacgctcctaaagctggacagctggacacatggctggagatgaac
cctgggtacgaggtggcccctcgctctgacagtgaagacagtggatcggaagaggaggag
gaggaagaggaggagccccagccggcagtgcctccagtagtggtcctcccagtgttagtg
gggttagaggagaagaagaagaagatcccagacccagacagtgaagaagtatcagaggtg
gacgtacgacacatcatagagcacgctaaacaggatgtggatgatgagtataacagtgca
gaggcagcgttcgctcggggactccagtcttactacgctgtggcccatgctgtcactgag
agagtggagaaacagtccacgatactcatcaacggacaactgaaacagtaccagattaaa
ggtctggagtggctggtgtctctctacaacaacaatctgaatggtatcctggctgatgag
atgggactaggaaagaccatccaaaccatcgctctcatcacgtacctgatggagaacaaa
cgagtcaacggacctttcctcatcatagtaccgctctcaactctctctaactgggtgtat
gagtttgacaagtgggctccgtctgtagtgaaagtctcctacaagggttcccctcaggcc
agaagggccttcatcccccagctacgcagcggcaagttcaacgttctcctcactacctat
gagtacatcatcaaggataaacaggtcctagccaagatccggtggaagtacatgatcgtg
gacgagggccaccggatgaagaaccaccactgtaagctgacccaggtcctcaacacccac
tacctggcccccaggagagttctcctaactgggacaccgctccagaacaagctgcctgag
ctctgggccctgctcaactttctcctgcccaccatctttaagagctgcagtacctttgaa
cagtggttcaatgcaccattcgctatgactggagagaaggtggatctaaatgaagaggag
accatcctgattatccgtcgcctccacaaggtgctccgccccttcctgttacgcaggctc
aagaaggaagtagaggctcagctaccggaaaaggtggagtatgtaataaagtgtgatatg
tcagcgctccagagggttctgtacagacatatgcaggccaagggagtcctactgacagac
ggctctgagaaggacaagaagggtaaaggaggtaccaagactctgatgaacaccatcatg
cagttgaggaaaatctgtaaccatccctacatgttccaacagatagaggaatctttctct
gagcatttaggattttccggagggatagtgagtggtcttgacctgtaccgagcctcgggg
aagtttgaggtgctggaccgtatcctgcccaagctgagggccaccaaccacaaggtgttg
ttgttctgtcagatgacctcgctcatgaccatcatggaggactacttcgcctaccgcaac
ttcaagcacctgcgtctggacggcaccaccaaagcagaagacaggggcatgctgttgaag
gcgtttaacgacccagcctcccagtacttcatcttcctgctcagtaccagagccggcggg
ctgggcctcaacctgcagtcagctgacaccgtggtcatcttcgactctgactggaaccct
caccaggacctgcaggcccaggaccgcgcgcaccgcatcggccaactgaacgaggtccgc
gtcctgcgtctctgcaccgtcaactccgtagaggagaagatcctggcggcggccaagtac
aaactcaacgtggaccagaaggtcatccaggccggcatgtttgaccagaagtcatcgagc
cacgagcgccgtgccttcctgcaggctatcctggagcacgaggaacaggacgaggtcggg
gccccgggcggcgtgtggaagtctggggggtcttgggaggaggacgaggtgccagacgat
gagacggtcaaccagatgatcgccaggagcgaggaggagtttgaccacttcatgcgtatg
gacctggacaggaggcgtgaggacgctcggaacccccgccgtaagccccgtctgatggag
gaggacgagctgcccacctggatcatgaaggatgacgcagaggtggagagactcacctgt
gaggaggaagaggagaagatgtttgggagggggtcccgccagcgcaaggaggtggactac
agtgactcactcaccgagaagcagtggctcaaggccattgaggaaggcacgttagaggag
atcgaggaggaggtgcgtcacaagaagaccacccggaagcgaaagcgtgaccgcgatgac
ctccctggcccctcctcttcctcctcggggggcaggcggagccgggacaaggacgaggac
gggaagagacagaagaagaggggacgcccccccgcagagaaactctcccccaaccccccc
gctctcaccaagaagatgaagaagatagtggacgctgttattaaatacaaagacagcagt
aatggtcgtcagctgagtgaggtcttcatccagctgccctcgcgcaaagagctgccagag
tactacgagctcatccgcaagcctgtcgacttcaggaaaatcaaggagaggatccgtagc
cacagataccgtagtctcggagacctggagagagatgtgatgctcctctttcagaacgca
cagaccttcaacctggagggatcactgatctacgaggactccatcgtgctccagtcggtg
ttcaccagtctgagacagaagatcgagaaggaggaggacagcgagggagaggacagtgag
gaagaggaggaggacctggacgaaggctccgagtcagagtgtgagtcatcactgaagaaa
ggaacccgctcagtgaaggtgaagatccgtctgggacggagagagaagagtagtgaccgg
gggaagggtaggagacgtctgggacgcacccgagccaaacctgtagtcagcgacgacgac
actgaagaggagcaggaggaggtgaggggagaggaggaacgctcccccagtggcacagat
gaagaatcctaa
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integrated database retrieval system
