Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424476
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Entry
139424476 CDS
T10872
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139424476
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139424476
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GFIT
Other DBs
NCBI-GeneID:
139424476
NCBI-ProteinID:
XP_071032460
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Position
13:15384498..15395281
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AA seq
649 aa
AA seq
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MRGSSSYGDRDRDRGRDKGPRFGSSSWGGPPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTQYDIDEFRRKKEITVSGTGCPRAMTSFHQAQFPQYVMDVLLSQDFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAHDYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDYV
QINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCERRVRSVSGGNKPDSRGSSFSRDGRSGRGRD
GDTRSSYRDRSKVSRGSYGSGGADQYQSYGGGTQYSSRAGGAANGAPRGSSDRGQNQSSQ
PQGVLGPAPPPAAGPKPLMAQLMAPPQPPLMSFIGQPPYPFSPPPPPRK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtatggagaccgagatagagaccgtggacgagacaaagggcct
cggtttgggtccagtagctggggcggccctccccctatgaagaagtttgggaaccctgga
gaacgccttcgcaagaagaagtgggatctggacgagctgcccaagtttgagaagaacttc
tacaacgagcacccagagctccagcgcatgactcagtatgacatagatgagttccgcagg
aagaaggagatcacagtcagcggtactggctgccccagggccatgaccagcttccaccaa
gcacagtttccccagtatgtaatggatgtgctactgagtcaggacttcaaggagcccaca
tctatccagtcacagggcttccctttggccctgagtggcagggacatggtgggcatcgct
cagactggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggtcctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcatgattatggaaagacctcccgcatcaagagt
acctgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtgctggacgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccagaccgccagactctgatgtgg
agtgccacctggcccaaggacgtgcgtcagctggcagaggacttcctgcgggattatgtc
cagatcaacgtaggagctctggagctcagcgccaaccacaacatcctgcagatagtggac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacaaagaagcgctgtgacgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgacagaattccgtagcggcaaagcccctatcctcatcgccact
gatgtggcgtctcgcggtctggacgttgaggatatcaagtttgtcatcaactatgactac
cccaactcgtctgaggactacgtgcacaggatcggccgtacagcccgcagcaccaacaag
ggcacggcctacaccttcttcaccccgggtaacctgcgccaggccagggacctggtccga
gtcctggaggaggcccggcaggccatcaatcccaaactgctgcagctggttaactctgga
catgggggaggaggtggtggcaggatgcgttatcgtggcggcggttccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagcgtcgcgtgcgctccgtcagtgggggcaac
aagccagacagccgcggcagcagctttagccgggacgggcgcagtggcaggggtcgggac
ggagacactaggtcctcctacagggaccgaagcaaggtcagccgggggagttacggctcc
gggggggccgaccaataccagagctatggtggtggtacccagtacagctccagggctggg
ggggctgctaatggggcccctaggggtagtagtgataggggccagaatcaatccagtcag
ccccagggtgtgttgggtccagctcctccacctgcagcagggcccaagcccctcatggcc
cagctgatggccccgccacagccccctctcatgagcttcatagggcagcctccgtacccc
ttttctcccccccccccacccaggaagtag
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