Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424486
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Entry
139424486 CDS
T10872
Name
(RefSeq) 40-kDa huntingtin-associated protein-like isoform X1
KO
K20135
factor VIII intron 22 protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139424486
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139424486
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP
TPR_1
TPR_12
TPR_2
TPR_11
TPR_8
Foie-gras_1
TPR_14
Motif
Other DBs
NCBI-GeneID:
139424486
NCBI-ProteinID:
XP_071032479
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Position
13:15815285..15820396
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AA seq
357 aa
AA seq
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MIVSNETILSKNQSKRVSHLYFRVWFIYVFHLLLTMAAEGDFLMRYRAVSNKLKKRFLRK
PNVAEASEQFGQLAKELKQQDCLQYAAFCDLAMARCEQTLFNAPGEALALTDAARLFLLS
EKENRALQAPGFDEHLQAALNCYSFAIKVYIEMNQPVMAASLSLELGNALKEMNRPGEAI
VHYQRAAELQTQQPIESLLSMGEMATCKILTRDYDGSLSVLTEMQLMCQERGLQLPGTST
PVGAFLDIVAKCEISRVLLLMLLEQCLLQPPPQKLLPEHAQTLERYAWESFDPHSQVTFL
PENVFLLLQSVVMACQEKDTESLKSLQPELWPLLSAEQNHLLHLVVQERITPSGQGI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgattgtatccaatgagactattttgagtaagaaccaatcgaaacgcgtctcccatctc
tacttccgggtttggtttatttacgtttttcatctattgttgaccatggcagcggagggg
gactttctgatgagatatcgtgctgtatcaaataaattgaaaaaacgttttcttcggaaa
cccaatgtagcagaagcaagtgagcagtttggtcagttggctaaagagctgaagcagcaa
gactgccttcagtatgcagctttctgtgaccttgcaatggcaaggtgtgagcagactctt
ttcaatgctcctggggaggccctggccctaaccgatgctgcccggctcttcctgctctct
gagaaggagaacagagcactacaagccccaggcttcgacgagcacctgcaggccgcactc
aactgctacagcttcgccatcaaggtgtacattgagatgaaccagcctgtcatggccgcc
agtctatctctggaacttggcaatgccctcaaggagatgaacagaccaggtgaggccata
gttcactaccagagagcagcagaactccagacacagcaacccattgagtctctgctgtct
atgggagagatggccacctgcaaaatactcacccgtgactatgacggctcgctgtccgtg
ctgacagagatgcagctgatgtgtcaggagaggggactgcaactgcccggcaccagcacc
cccgttggtgcatttctggacattgtggccaagtgtgagatttctagagtacttttgctg
atgctgcttgagcaatgccttttgcagcctcctccccagaagttgttgccagagcatgcc
cagaccctggagagatacgcctgggagtcgtttgaccctcatagtcaggtgaccttccta
cctgagaatgtcttcctgctcctgcagtcagttgtgatggcctgccaggaaaaagacaca
gagtccctcaagtctcttcaacctgaactctggcctcttctctcagcagagcagaaccac
ctccttcacctggtggtgcaagagcggatcaccccctctggacaggggatttag
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