Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424509
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Entry
139424509 CDS
T10872
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
139424509
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
139424509
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139424509
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
139424509
Glycosyltransferases [BR:
ocla01003
]
O-Glycan biosynthesis
Glycosaminoglycan
139424509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
139424509
NCBI-ProteinID:
XP_071032532
LinkDB
All DBs
Position
13:complement(16238029..16378213)
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AA seq
969 aa
AA seq
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MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGANSNKRRERLQEKAHAEQATWKDNAPILSRNSNEVLQ
YGRAVAQNGSLPVGPKAVGAGVDSRNHHSRSSQPQSQDQAQAYPQSQSHPQTQHRHQHQH
QTRKQATAAPLEAVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMPEK
VTRYCPIEGKANANVAWEEDSSEGPPSAPIRIAFVLVVHGRASRQFQRLFKAIYHTSHYY
YIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMSDLITMTDWSW
DFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPEGISVDGGSDWFLLNRPFVEYVINSQDDLVTNMKRFYTYTLLPAESFFHTVL
ENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTSRPTFF
ARKFEASVNQEIVNQLDGYLFGPMPQGTPGLQAYWESAFDEADGVATLSDTQLTLYHAFA
RLGLARAAASLQGDPKDDSCRYFPMGHPVSVHLYFQSDQFQGYLVQHHATNLATSKLETL
ETWVMPRMTYKVASPPSTFTRLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWSKG
PNVTATVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVAET
RFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEQAKRNA
ALTGPALEHWVDGLVGAMWEAGDVCSTSMTGGPGTSCPVMQTCAKTPWSSLSPDPKSQLV
PPHADGRIR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgccttgatagcg
gctctcaccgtgctgctggtccagacgctgatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagccc
ccagggggcgctaacagtaacaaacgcagggagaggctgcaggagaaggcccatgccgaa
caggcaacctggaaggataacgctccgattctcagccggaactccaacgaggtcctccag
tatggaagagccgtagcccagaatggctcacttcctgtgggcccgaaagcggttggagcc
ggggtggactccaggaaccaccacagccgctcttcacagccacagagccaggatcaggct
caggcttacccccagtcgcagtcccacccccagactcaacatagacaccaacaccagcat
caaaccaggaagcaggcgactgcggctccattggaggcagtttacgaccagccgccaaag
tgtgagatcagtggtaaggaagccatttcagctctgtccagagccaagaccaaggagtgc
cggcagcagatagctgaagtgtactgtagacacaaggaaggtcaactgatgcctgagaag
gtcacccgctactgtcccatagagggtaaggccaatgccaacgtggcgtgggaggaggac
tcgtcagagggcccaccgtcggcccccatcaggatagccttcgtcctggtggtccacggc
agagcctcacgacagttccagagacttttcaaggccatctaccacacctcacactactac
tatatacatatagaccagcgctccaactaccttcacagacaggtgcaggccctggcctcc
cagtaccccaacgtgagggtgacgccctggaggatggctaccatctggggcggtgccagc
ctgctcaccatgtacctccgcagcatgtcagacctcatcaccatgaccgactggagctgg
gacttcttcatcaacctcagcgctgcagactaccccatcagaaccaacagccagctggtg
gccttcctgtccaagtacagagacatgaacttcatcaagtcccacggcagagacaacgcc
aggtttatccgcaaacaaggtctggaccgactgttctttgagtgcgacacccacatgtgg
cgacttggcgaccgcaaaatcccagaaggcatttctgtggacggcggttctgattggttc
ctgctcaatcgtccgttcgtggagtacgttataaactcccaagacgacctggtcaccaac
atgaagcgcttctatacctacacactgctgcccgccgagtcgttcttccatacggtgctg
gagaacagtgctcactgtgagagcatggtggacaacaacctgcgcatcacgaactggaac
aggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgctccccc
aacgactttaaacctgccgactttcaccgcttccagcaaacgtcccgtcctacgttcttc
gccaggaagtttgaagccagtgttaaccaggagatagtgaaccaactagatggctacctg
tttggacccatgccccaggggacccctggcctccaggcctactgggagagtgcgtttgac
gaggcggatggggtcgcaaccctgagcgacacacagctcacactctaccatgcgtttgct
cgtctgggcctggccagggcggcagcatcgctgcaaggagatcctaaggatgacagctgc
aggtatttccccatgggccacccggtgtcagtgcatctctacttccagtcggaccagttc
caaggctacctggtccagcaccacgccactaacctggcaaccagcaagctggagaccctg
gagacctgggtgatgcccaggatgacctacaaggtggcttcccctcccagcaccttcacc
aggttgcagtttgctgagatcggcacagagtgggatgccaaagagcgcatgttccgtaac
ttcggtggtctgatgggtcccatggacgagacggtcgggatgcagcggtggtccaagggc
cccaacgtgaccgccaccgtggtgtggatcgaccccaccaacgtcatcgctgccacctac
gatatcctgatcgacgccagcgcagagtacacccactacagaccccccctgaaccagcct
ctcaggcctggggtgtggaccatacgggtgttgcatcactggagccctgtggccgagaca
aggtttctgattagtccgctggcttatatgaagcatcagcctataagacaagaggacacg
ctgaagctccacaatggaccagccaagaacagttatatggagcagagcttccacggactc
aaccccgtgctcaacatccctgtacacctgggccaggtggagcaggctaagcgcaacgcc
gccctgactggccccgccttggagcactgggtagacggcctggtgggtgcgatgtgggag
gctggggacgtgtgttccacctccatgacagggggacctggaacatcctgccccgtcatg
cagacctgcgccaagaccccctggagctcgctcagcccggaccccaagtcccagctggtt
ccgccgcacgccgacgggcgcatcaggtag
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