KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424511
Entry
139424511         CDS       T10872                                 
Name
(RefSeq) integrin alpha-8-like
  KO
K06584  integrin alpha 8
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510  Focal adhesion
ocla04512  ECM-receptor interaction
ocla04514  Cell adhesion molecules
ocla04810  Regulation of actin cytoskeleton
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139424511
   04514 Cell adhesion molecules
    139424511
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139424511
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139424511
   04810 Regulation of actin cytoskeleton
    139424511
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocla04515]
    139424511
Cell adhesion molecules [BR:ocla04515]
 Integrins
  Integrin alpha subunits
   139424511
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 139424511
NCBI-ProteinID: XP_071032538
LinkDB
Position
2:22730734..22783544
AA seq 1055 aa
MCAYRMYAFGGMLCRVVSVLWPVLSIVSGFNLHAERPAVFRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKDKVVACAPLYHWRTVVNGEKDPVGTCYVAVQNFSAYAE
YSPCRTNDPNPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSLK
AVLRRVPGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVINS
TNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYLY
LQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIYN
GQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSVY
RARPVVSVEAEMILTPRILNPDDRSCLLTESDIMVTCLRVDICAKVSGVGIPDSVVLNAE
LQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTPI
SLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASMDRTELV
VGDDNLVMLTINAVNEGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSRL
VVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSISA
RAQLDLRGVCHPSQVVLPFPHWEPKENPVKEDDVGPQVTHIYELHNSGPSSIREAVLQVG
WPSRFRDEHLLYALEVLTVGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRYR
RATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYLL
NSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLAM
LTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq 3168 nt   +upstreamnt  +downstreamnt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcgattgtctcgggcttcaacctgcatgcggagcgccctgcggtgttc
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggcaaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtcacaccagtggtttggagcctcagttagaact
cacaaagacaaagtggtggcctgtgctcctctctaccactggcgtactgtggtgaacggt
gagaaggacccggtaggaacctgctatgttgccgtccagaacttcagcgcctacgcagaa
tactcaccctgtaggaccaatgatccaaacccggagggacagggtttctgccaggccggg
ttcagtgtggacttcaccaaggaggggacactggtggttggtggacctggcagcttctac
tggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctgaaa
gccgtgctcaggagagtccctggagagaaacagacacacgctgcagctgatacccatgac
gacagctacctaggttactctgtggcagtaggggaattcacaggagactcagagcaagag
ctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaactcc
actaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggctat
tctgtggctgttactgacctcaacggagatgggtatgatgatgtactggtaggagcacct
ctctacatggagagagagagggagagtaaacctaaggaggtgggccgtgtctacctgtac
ctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacaccttt
ggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaacgac
gtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctacaat
ggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcctgg
gcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctggac
aacaaccattaccctgatctgatagtgggagcatttggcaaaggggaagtgtcggtgtac
agggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctgaac
cctgatgaccgatcctgcctcctgacagaatctgatatcatggtgacctgtctaagggta
gatatttgtgcaaaggtgagcggtgtggggattccagactctgtagtcctgaatgcagag
ctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctggat
tcccatcagccccagcacacaggggtcctaacgcttggccacagccgtcctcactcctgc
ctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactcccatc
tcattggctctgaactacagtttagcccctccatccaacctggacctcccccctgtcctc
aaccgctacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggggaa
gacaacgagtgtattccagacctccagctatctgcaagcatggaccgtacagagctggtg
gtcggggatgacaacctggtcatgttgaccataaacgcagttaacgaaggagagggggca
tatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaacgc
aggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccagactg
gtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggtttaagg
tttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatccac
agttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctctgcc
agagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgtttcct
cattgggagcccaaagagaatccggtcaaagaggatgacgtaggaccccaggtcacacac
atctacgagctccataactcaggtcccagtagtatccgggaggcggtgctccaggtgggc
tggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacagtcgga
ccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagacatcctctgtt
caggacactccagaactgttgggctttctgaggaacagtagctctcctcaccgctacaga
cgagccaccaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatcatt
tgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtcaag
atccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctcctc
aactctaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcctta
ccccaacacaccacttcaatgggtacactggtgctttggggaactcctgatgtggcgttt
gctattcctctgtgggtcatcatcctagccatcctactgggactgctggtcctggccatg
ctaacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggatgac
gtgtcagaccgtgagcagctgacttctgaccaattagcagacgcctaa

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