Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424533
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Entry
139424533 CDS
T10872
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139424533
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
139424533
Small GTPases and associated proteins
Rab associated proteins
139424533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
FYVE
Motif
Other DBs
NCBI-GeneID:
139424533
NCBI-ProteinID:
XP_071032560
LinkDB
All DBs
Position
13:17519674..17610743
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AA seq
1715 aa
AA seq
DB search
MSSASVGPQGGPRPPTAPPTVPELPDLSHLTEEERKIIMAVMDRQKEEEEKEEAVLKTLH
QQFESYKEQVRRIGVETRRQQQGQHKDDAPICGICRKTKFADGCGHHCSYCQTRFCARCG
GRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGEWFSGARQMSLDGGLNAPPTGGDTQRGD
RKLLRSRSQAPPSSSGNAGAAPDGTHQSPTVQAKGVLDTMPASRARSEPPRDKKRPLSLH
EQNGKPGGLGRGRGGRGPPGKLQTVASQEEFCGPGDIDWRDGRHLEKVRSHDYPDGGDQG
NRPDLRRRPPEEDELERKRRQEEEFQARYRSDPNLARYPVKPQKEEQEMRMHAKVSKVRH
ERRHSNNAINEVGLEGGGGGGGNMGDVPENRLRRGGGGGGGEPDRKASLENHRAYSMDRT
VGGGGGGGMGQGPQGGSPLLKQNQNHGPLQPSGGGSRTVPHPGAHPHQGPPPPLGWDPPK
GPHPSQLDPNSQAAMMHKAGREKPGDSLLRKDSQSSDQSESLRPPPPRPYKSKRGVNKRQ
MSISSSEEEGASTPEYTSCEDVDMESVSEKGDWDCHPLDPAMWHHPVTWQPSKEGDHLIG
RITLSKRSAVPREAGSLLGLKVVGGKMTETGRLGAFITKVKKGSLADIVGHLRAGDEVLQ
WNGKSLPGATKKEVYNIILESKAEPQVEIVVSRPIGSIHRIISNNFLRKVYRAYQDIPRI
PETSHPPLESTGSSSFESQKMERPSISVMSPTSPATLRALPVILPGQLSVKLWYDKVGHQ
LIVNVLQAIDLPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSAGPKWNQTFLYSHV
HRRDFRERMLEITVWDQPRIQEEESDFLGEILIELETALLDDVPHWYKLQTHDVSSLPLP
QPSPYLPRRHASHDSPSKKLQRSHRIIDTEFDDTGAERNSRERERNSTLTVPEQQRLAQH
RSRSVSPHREDITRARSRPAHVPMQRSLDEIHQNRHHSCSPSRYHDSHGEHRSGDSDYEY
SEDSEVLEMHRSIRGGSAECLHTNRGVARSSNTLPPKMPLLVNGINKDIYSNTLPACLKS
KPPRGHQGGGGPASRSVLTHRVLRFTDEVTVSDLQPSLDRVRSASTTCLRPDTNLHSPDK
DRCSNSLPRRQSTGPRILVEQASPEEERQSGSLGRPDSQRGNSKKGLEADSRIQPTSILR
GSRGRGGPLRPFNQTPLGGSAPNSPRQDRTHTHSPSPPTGTPQSGRRGRQLPQVPARSSS
VEQALAVEERARQMNMKVHSYRPSGSNDPETNLKTKREMYADQRRSSDNVSARSSDSDMS
DASALSRASSASRLSSTSYMSIQSERPRGRLRSKSLEEEKKERRISWGMNGEQERMRAAG
KRRFSQELKRRRHTVSGDPKDASRQVRAAPGRTMLKSTSVSGEIYASERTDGSQSDTALG
TVGMGGKKRRSSLSARVVSIVSNRRSRSTSQIVGPEGKGKKEKGASIQRSTETGMAVEMT
RNMSRQSSKESTNGTMNSCNSEGNLLFGGVRLGQPGNQFSDFLDGLGPAQLVGRQTLATP
AIGDIQIGMMDKKGQLEVEVIRARGLVQKPGSKSLPAPYVKVYLLNNGAYVAKKKTKIAR
KTLDPLYQQALQFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLTSTVIGWYK
LFPPSSLVDPTLASLTRRASQSSLDSSSGPPGTRS
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcctcggtggggccccagggcggccctcgcccacccaccgcgccgccgacc
gtccccgaactgccggacctcagccatctcaccgaggaggagaggaaaataattatggcc
gtgatggatcggcagaaggaggaagaggagaaagaggaagccgtgttaaagacgctgcac
cagcagtttgagagttacaaggagcaggtgcgtcgcatcggcgtggagacgcggcgccag
cagcagggccagcacaaggacgacgcccccatctgcggcatctgccgcaagaccaagttc
gccgacggctgcggacaccactgctcctactgccagaccagattctgcgcccgctgcggc
ggacgcgtctccctgcgctccaacaacgaggacaaagtggtaatgtgggtatgcaacctg
tgccgtaagcaacaggagatcctcactaaatcgggagaatggttttcgggggcgaggcag
atgagcctggatggcggcctgaacgccccgcccacggggggtgacacccaacggggggac
aggaagctactccgctccaggtcccaggccccgccctcttccagcggtaacgcaggggcg
gcgcccgacggaacgcatcagtcgccaacggtccaggccaagggagtgttggacaccatg
ccggcctcacgcgctcggagcgaaccaccacgagacaagaaaagacctctgtccctccat
gagcagaacggtaagcccggtggtctgggtcgtggtagaggaggccggggacccccaggg
aagcttcagaccgtggcatcccaggaggagttctgcggtcctggggacatagactggcgg
gacggccggcacctggagaaggtccgctcccatgactaccccgacggcggcgaccaagga
aatcgccccgacctccggagacgccccccggaggaggatgagcttgagcgcaagcggcgc
caggaggaggagttccaggcgcgttaccgcagcgaccccaacctggcgcgctacccggtc
aagccgcagaaggaggagcaggagatgcgcatgcacgccaaggtgtcgaaggtgcgccat
gagcggcgccacagcaacaacgccatcaatgaggtggggctggagggtgggggaggaggg
ggagggaacatgggggatgtgcctgagaatcgtctccggaggggcggcggtgggggtggt
ggagaaccagaccgcaaggcatccttggagaaccaccgcgcctactccatggacaggacc
gtggggggtggtgggggtggcggaatggggcagggaccccagggaggctcccccctcctc
aaacagaaccagaaccacggaccccttcaaccatctggtggtggctcacgaacggttccc
catcctggtgctcacccccaccaaggacccccccctccattaggctgggacccccctaag
ggaccccaccccagccagctggaccccaactcccaggcagccatgatgcataaggctggg
agggagaagcccggggacagcctgctgcggaaggactcccagagctcggaccagtcggag
tcgctgcggccgcccccacccaggccctacaagagcaaacggggcgtcaacaagaggcag
atgtctatcagcagctcagaggaggagggcgcctccacgcccgagtacaccagctgtgag
gacgtcgacatggagagcgtcagtgaaaaaggtgattgggactgccatcctctggatcct
gctatgtggcatcatccagtgacatggcagccgtccaaggagggcgaccacttaatcgga
cgcatcactctgagcaaaaggtcggccgtgccccgcgaggcaggctccttactagggtta
aaggttgtgggtgggaagatgacagagacagggagactgggggccttcatcaccaaagtc
aagaaaggaagtctggcggacattgtcggccacctacgagctggtgatgaggtactgcag
tggaacgggaagtcgttgccgggagcaaccaagaaggaagtgtacaacatcattctggaa
tccaaggcggagcctcaagtggaaatagttgtctcaaggcctattggatctatccaccgc
atcatttccaataacttcttgagaaaggtgtatagagcgtatcaagacataccaagaatt
ccagaaacatcccatcctcctttagaatcgacgggctccagttcctttgagtctcagaag
atggagcgtccctccatatcggtcatgtcccccaccagccctgctaccctcagagccctc
cccgtcatcctgcctggacagctctctgtaaagctgtggtatgacaaagtgggccatcaa
ctgatcgtcaacgtccttcaagccatagacctgcccccccgaccggacgggcgacccagg
aacccctacgtcaagatgtacttcctccctgaccgaagtgataagagcaagcgcaggacc
aagacggtaaagaagagcgctgggcccaagtggaaccagacgttcctgtactcccacgtc
caccgcagggacttcagagaacgcatgctggagatcactgtctgggaccagcctagaata
caggaggaggagagtgacttcctgggagagatcctgatagagctggagactgccctgctg
gacgacgtccctcactggtataaactccagacccacgacgtgtcctctctacctctgccc
cagccatccccttacctcccgcgcagacacgcctctcacgacagccccagcaagaaacta
cagaggtcccatcgcatcattgacacagagtttgatgatacaggtgcagagcgtaactcg
agggaaagggagaggaacagcaccctgactgtcccagagcagcagagactggcccagcac
cgctccagatctgtgtcccctcaccgcgaggacataacaagggcccgctcccgccctgca
cacgtccccatgcagaggagtctggatgagatccatcagaaccgccaccactcctgctcc
ccctctcgttaccatgactcccacggggagcaccgctccggggactcagactacgagtac
tccgaggacagtgaggtcctcgagatgcacaggtctatccgaggcgggagtgccgagtgc
ctgcacacaaacaggggcgtagctaggtcgagcaatacactaccacccaaaatgccccta
ttagtcaatggtataaacaaggacatatacagcaacaccctccctgcatgcctaaagagc
aagcctccccgggggcatcagggagggggcggtcccgcctcccgtagtgtcctcacgcac
cgtgtgctcaggttcactgatgaggtcaccgttagtgatctgcagcccagtctggaccgg
gtgaggagtgccagcaccacctgcctcagacctgacaccaacctccactctcctgataaa
gacagatgctccaactctctgccccgcagacagtccacaggccccaggattttagtagag
caggcctccccagaggaagaaaggcagtcagggagcctgggcagacctgacagtcagaga
ggtaacagcaagaaaggcctggaggctgacagtcgtatccagcccacctctatactgagg
ggcagtagggggagagggggaccgctgcgtccctttaaccagacacccctggggggatct
gcccctaactcaccacgacaggacagaacacacacccacagcccctcccctcctacgggg
actccccagtcaggtcgcaggggcagacagctgccacaggttcctgccagaagcagcagt
gtagagcaagctctagcagtagaggagcgagccagacagatgaacatgaaagtacattcc
taccggccttcaggctccaatgaccccgagacgaacctcaagaccaaacgagagatgtat
gcggatcagcggcggagctctgacaacgtgtcggcccgctcgtcagacagcgacatgagt
gacgcgtcggccctatcccgcgccagcagtgcctcacgcctcagcagcacctcctacatg
tccatccaatcagaacgcccgcgcgggcggctcaggtccaagtctttagaggaagagaag
aaagagaggaggatctcgtgggggatgaatggagagcaggagaggatgagggcagcaggg
aagagacggttctctcaagagctgaagaggaggagacacactgtgtctggggaccccaaa
gacgccagtcggcaggttcgtgcggcgccgggccggaccatgctgaagagcacaagcgtg
agtggtgagatctacgcgtcagagcgcactgacggcagccaatcggatacggcgctgggc
acggtgggcatgggtggcaagaagagacgctccagcctcagtgccagggtggtctccatc
gtctccaacagacgtagtcgcagcacgtcgcagatcgtcggcccggaggggaaggggaag
aaggagaagggtgcgtccatccagaggagcacagagacgggcatggctgtagagatgacc
aggaacatgagtcgacagtccagtaaagagtccaccaacggcaccatgaacagctgcaac
tccgagggaaatctgcttttcggtggggtgcgtctgggacagccaggcaaccagttcagc
gacttcctggatggtctgggtcccgcccagctggtgggcagacaaacgctggccacacct
gccataggtgatattcagatcggaatgatggacaagaagggtcagctggaggtggaggtg
atcagagctcggggccttgtacaaaagcctggatccaaatccctccctgctccatacgtc
aaggtctatctgttgaataatggagcgtatgtagccaaaaagaaaaccaagattgcacgg
aaaacgctggacccgctgtaccagcaagcgctgcaattcgaggagagcccacagggtaaa
gtcttacaggtgatcgtctggggagactacggacgaatggaccacaaaagcttcatggga
gttgcacaaatcctattggaggaactagacttaacaagcacagtgattggctggtacaag
ttgttcccaccctcctccttagtggaccccacactagcctccctgactcgacgtgcttcc
cagtcgtcattggacagctcctcgggcccaccgggcacccgatcctag
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