Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424560
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Entry
139424560 CDS
T10872
Name
(RefSeq) rhomboid-related protein 3-like
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139424560
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
139424560
Peptidases and inhibitors [BR:
ocla01002
]
Serine peptidases
Family S54: Rhomboid family
139424560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
EF-hand_9
AIF-1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
139424560
NCBI-ProteinID:
XP_071032633
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Position
13:complement(20903305..20978351)
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AA seq
408 aa
AA seq
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MPDASRDVPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDSESSGFISTE
RFRDLLAAHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGGRQ
LKGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAV
FMYYGLQLDRWVLQVSSPHFLRGPLPYHPQLRIQAWRYLSYAFMHAGIEHLGLNMAMQLL
VGVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNW
SGMRCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVV
VLQNYEQRLQEQSLFWIFFSVYFLFVLCAVFWNVFAYSLLDVRLPPTP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgtctcgggacgtgccggtgcattcctctccagcagtggcagcgaacgcg
gagggagacgagatagaagtgctggagagtatcgatgtccttcccgtggccccagaggac
caatggaaatctctgttcgacaagttcgactcagagagttcaggcttcatcagtacagag
cggttcagagacctgctggcggcccacggctcggagctggaccctcacaagctggaggtt
ctattggccctcgccgacggcaacgcggacggaaagatctgctaccaggactttgtcaac
ctgatgtccaacaagcgcagcaacagcttccggcgggccatcctccaggggggtcgtcag
ttgaagggggccggggccctgggggaggaggtgggtctgggtctgtcccagaggctggtg
aggcacatcgcctatgagaccctgccccgggagatcgacaggaagtggtacttcgacagc
tacacctgctgcccaccaccctggctcatcctggcgatcaccatcgctgaggtggcagtg
ttcatgtactatggcctgcagttggaccgctgggtgctgcaggtgtccagtccccacttc
ctgaggggcccactgccctaccacccccagctacgaattcaggcctggagatacctcagc
tatgccttcatgcacgcagggatagaacacctgggtctgaacatggccatgcagctgctg
gtgggagtccctcttgagatggtccacggagcgctgaggataggactggtctacgtgtgt
ggcgtactggcaggctccctggccgtgtctgtcactgatatgactgctccggtggtgggg
tcgtctggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactgg
tcgggtatgagatgtcagtttaagctgttccggatggccatggctctggtctgcatgagt
gtggagttcggccgtgccgtgtggctgaggttctacccgccggccttcccgccctgcccc
aaccccagctttgtggcccacctggggggtgtgatggtggggctcaccctgggggttgta
gtcctccagaactacgagcagcgtctccaagagcagtctctattctggatcttcttctca
gtctacttcctctttgtcctctgtgctgtcttctggaacgtcttcgcctacagcctgctg
gacgtccggctccctcccacgccgtga
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