Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424561
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Entry
139424561 CDS
T10872
Name
(RefSeq) semaphorin-4A-like
KO
K06521
semaphorin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139424561
CD molecules [BR:
ocla04090
]
Proteins
139424561
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
139424561
NCBI-ProteinID:
XP_071032638
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Position
2:complement(22877677..22900611)
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AA seq
774 aa
AA seq
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MAYGSLAWSLSALLGLLLTPSLGLEPPRISFPLESPERPLPLFSQPDIKNTTTLLLSDDG
STLFVGAQDAVLSLDVSQPDVITMKTKMEWKPPPDVLHECTTKGKKETTDCPNFVRVLQP
INDTHLYACGTFAYNPHDTYMDTDTLTMAKVPRKYNNGKGCCPFNPYQRNTAISVDGELF
TATTNDFLGKTPMVSRHLSKDGRPDVSQDTSVTLNEPTFVSSASDTSEGKVYFFFSEIGN
EYSFLDEFKVARVAQVCKDDIGGERILQKRWTSFAKAELLCRPPKELPFNIIQDVFTLAP
SEGYSTQDIIFYGIFTSQWSVASGQSAVCAFRLGDIKDVFAGNYKIFQNHQWSPRMYKTS
NLGKCGLANASDTTLMAVKESFLASGSVRPIGSAPVLNSPDQRYSRIAALRTKAANGQDY
TILFLLSESGFLHKAVLLNTDTHIIEEIQVFRQPQLVKNILLSTSKGVLYVGTSEGVTQV
PVSQCSSYKSCAQCVLARDPLCGWDPASGHCASVSAIPANARQDVEHGNVMKECQGSLTA
KPLLVEVHAQLNEVVRLKCSRSSNLATLSWKSAKASALPHHLFFHSGDENLVFMATPDTF
GIYHCISVERGYEETAAIYTVRQSVSPQAIDTPAVQFRITTTETKDQMTTMMEIPSDTDK
LEDPVITTDVITTDKTPDTNSSTEKPEDMTPDLLSSSEKPEDHNEPLTAKNYHSELVAVS
FLLAVCVCVLVLGGLYGWHLQGRYKLGPSDTAEGGYKEENDPLEVSPPSIKKAE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgggagcctggcctggagtctctctgctctactggggcttctcctgacccct
tcactagggttggaacctccacggatctccttccccctcgaaagcccagagagacctctt
cccttattcagccaaccagacattaaaaacaccaccacactgttgctaagtgacgacggc
tccactctgtttgtaggggcacaagatgctgtgctctcattggatgtcagccagcctgat
gttataaccatgaagactaagatggaatggaagccccctccagatgttctacacgagtgt
accactaagggcaagaaagaaacgacggactgtcccaactttgtgcgagtgctgcaaccc
atcaatgacacccacttgtatgcctgtggaacatttgcgtacaaccctcatgatacctat
atggacacagacactctcaccatggccaaagtccccaggaagtacaataacggaaaaggt
tgctgcccgttcaacccatatcaaagaaacacagccatctctgttgatggtgagcttttc
acagccacgacaaatgacttcctgggtaagacaccaatggtctcccgccatctcagtaaa
gatggtcgcccagatgttagccaggatacctcagtgaccttgaatgagcccactttcgtc
agttccgcatctgacaccagcgaggggaaggtgtacttcttcttcagtgaaattggaaat
gagtacagcttcctggatgagttcaaagtagcgcgggtagcccaggtctgcaaggatgac
attgggggagagcgcatcctgcagaaacgctggacttcctttgctaaagccgaacttctc
tgtcggcctcccaaagagctgcctttcaatatcatccaggatgtgttcaccctcgctcca
tcagagggctactccacacaagatattattttctatggtatcttcacatcccaatggtca
gtggcttcagggcagtctgctgtgtgtgcctttcggcttggggacatcaaagatgtgttt
gctgggaattacaagatattccaaaaccaccaatggagtcctcgcatgtacaagactagc
aacctgggcaagtgtgggttggccaatgcctcagacaccactctaatggcagtcaaggaa
agtttcctagccagtggaagtgtgcgtccgataggcagtgcaccagttctcaactcccct
gaccagcgctacagtcggattgctgcactacggacaaaagcggccaatggacaggactac
accatactcttcctacttagtgagtctgggtttctccacaaagctgtgctgttgaacacg
gatacccacatcatagaggagatccaagtgttcagacaaccacagctggtgaaaaacata
cttctctccacctccaagggtgtgctttatgtggggacctctgaaggggtgacccaggtg
cctgtatcccagtgctcgtcctataagagctgtgcccagtgtgttttggcacgagacccc
ctctgtggctgggaccctgccagtggacactgtgccagtgtgtctgccattccagccaat
gcacggcaggatgtggagcatggcaacgtgatgaaggagtgtcaaggttccctcacagct
aaacctctgctagtggaggtgcacgcacagctaaatgaagtagtgaggttgaagtgttcc
agatcctccaatctggcaaccctgagttggaagtccgccaaagctagcgctctgccccac
cacctcttctttcactctggagatgagaatctggtcttcatggccacacctgacaccttc
ggaatctaccactgcatctctgttgagaggggttatgaggagacagcagctatctacact
gtgagacagagtgtctctcctcaggccattgatactccagccgttcaatttcggatcacc
accacagagactaaagaccagatgaccactatgatggagattccaagcgacactgacaag
ctagaggatccagtcatcaccacagacgtaatcacaaccgacaagactccagacaccaat
tccagtactgagaagccagaggatatgaccccagacctcctttccagcagtgagaaacca
gaagaccacaatgaacccttaacagccaagaattaccatagtgaattggtggcagtatca
tttctcctggctgtgtgtgtttgtgtgctagtgctaggagggctctatgggtggcacctg
cagggcagatataaattgggcccctcggacactgcagaggggggatacaaggaagagaat
gaccccctggaagtctcacctccctctataaagaaagcagaatga
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