Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424562
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Entry
139424562 CDS
T10872
Name
(RefSeq) mitochondrial Rho GTPase 1-A-like isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139424562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139424562
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ocla04031
]
139424562
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
139424562
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
139424562
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rho Family
Miro
139424562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
EF-hand_1
EF-hand_7
PduV-EutP
RsgA_GTPase
MMR_HSR1
ABC_tran
Dynamin_N
AAA_22
MCM
AAA
AAA_29
FeoB_N
EF-hand_8
AAA_25
AAA_5
SMC_N
Motif
Other DBs
NCBI-GeneID:
139424562
NCBI-ProteinID:
XP_071032634
LinkDB
All DBs
Position
13:complement(20980475..21015975)
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AA seq
661 aa
AA seq
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MRKDVRILLVGEPKVGKTSLIMSLVSEEFPQVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLSSEISKANVICIVYAVNNKKSIEKVTSHWIPLINDNTDKDSRVPVILVGNKS
DLVEHSSMETILPVMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKQ
MKPACIKALTRIFKVSDLDNDGILNDNELNFFQRTCFNAPLVSQALEDVKNVVRKNVIDG
VCDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQDYLFPLTLKVPPDCTT
ELNHNAYLFLQSVFDKHDKDRDCALSPEELKDLFDVFPYIPWGPDVNNTVCTNDEGWITY
QGYLSQWTLTTYLDVQRCLEYLGYLGYSIISEQESQAVAITVTRDKKIDLQKKQTQRSVF
RCNVFGDNGSGKSGFLQAFLGRNLTRQNTVSEEHMSYYAISTAYVYGQEKYLLLHEVFPD
FDVLSDTDLACDIVCLVYDASNPHSFEYCARVFKQYFMDTKTPCMMIAAKSDLQETKQLY
ALTPLEFCRKHKMPPPQAFTCNTADAPCKDIYTKLTTMAMHPHARLRCMCTCNRCTFCHL
QNFINSELVQTVKAKLYTAIFSRHVTQADLKSSTFWLRVSAGATVFAVLGFAMYRVLLKQ
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggacgtcagaatattactggtgggagagcccaaggtggggaagacttccctg
atcatgtccctggtcagcgaggagttcccacaggtggtgccctaccgggctgaagagatc
accataccggcagacgtcaccccagagagagttcctacacacatagtagactactcagag
gcggaacaaacagatgagcagttgtcttcagagatatcgaaggccaatgtgatttgcata
gtgtacgccgtcaacaacaagaagtccattgagaaggtgaccagccattggattccactt
ataaatgacaatacagacaaggacagcagggttcctgtcatcctggtcgggaacaagtct
gacctggtggaacacagcagcatggagaccatcctgcccgtcatgaaccagtacactgag
atagagacatgtgtggagtgttcagcaaagaacctgaagaacatatctgagttgttttac
tacgcccaaaaggctgtcctgcaccccactggccctttatactgtccagaggagaaacag
atgaagcctgcttgcatcaaagcgctgactcgcatcttcaaggtgtcagacctggacaac
gatgggattctcaatgataacgagctcaacttcttccagaggacatgcttcaatgcccca
ctggtatcccaggccctggaggatgtgaagaacgttgtgaggaagaacgtgatcgacggt
gtgtgtgacaacggcctcactctcaaagggttcctgttcctccacaccctcttcatccag
agggggagacatgagaccacctggacggtcctcaggaggttcggctacgatgacgacctg
gaactccaccaggactacctgttcccactcacgttgaaagtacctccagactgcaccacc
gagctgaatcacaatgcctacctcttcctccagagtgtcttcgacaaacatgacaaggac
cgggactgtgccctgtccccagaggagctgaaggacctgtttgacgtgttcccctacatt
ccctggggtcccgacgtcaacaacacggtgtgcaccaatgacgaaggctggatcacctac
cagggctacctgtcccagtggacgttgaccacctacctggatgtccagcgctgcctggag
tacctgggttaccttggttactccatcatctctgagcaggagtcccaggcagtggccatc
acagtgacgagggacaagaagattgacctgcagaagaagcagacccagcgcagtgtgttc
cgctgtaacgtcttcggggacaacggcagtggcaagagtggcttcctgcaagccttcctc
ggaagaaacctcacgcgtcaaaacactgttagcgaagagcacatgtcctactatgctatc
agcacagcatatgtgtatggtcaggagaaatacctgctgctccacgaggtcttcccggac
tttgacgtcctctcggacactgacctggcttgtgacattgtgtgtctggtgtacgacgcc
agcaacccccactccttcgagtactgcgccagagtcttcaagcagtacttcatggacacc
aagacgccgtgcatgatgatcgctgccaagtcggacctccaggagaccaagcagctctac
gccctcacccctctggagttctgtaggaagcacaagatgccccctccgcaggccttcacc
tgcaacacggcagacgcgccctgcaaagacatctacaccaaactcaccaccatggccatg
caccctcacgctcggctgcgctgtatgtgtacctgtaacaggtgcaccttctgccacctg
cagaacttcatcaactcagagctggtgcagacggtgaaggccaagctctacaccgctatt
ttcagcagacatgtgacacaggctgacttgaagagctccaccttctggttgagagtgagc
gcgggagccactgtgttcgccgtactgggcttcgccatgtacagagtgctgctcaaacaa
cggtga
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