Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424697
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Entry
139424697 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel gamma-1 subunit-like
KO
K04866
voltage-dependent calcium channel gamma-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139424697
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139424697
04261 Adrenergic signaling in cardiomyocytes
139424697
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139424697
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139424697
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Motif
Pfam:
Claudin_2
PMP22_Claudin
DUF981
DUF2975
Aq_1264_TM
Motif
Other DBs
NCBI-GeneID:
139424697
NCBI-ProteinID:
XP_071032872
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Position
13:24870980..24909407
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AA seq
225 aa
AA seq
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MHKRTKVKMTFFVILVGMASMFTAVVTDHWAVLSPRVEQVNATCEAAHFGLWRLCKKVIY
ISEADYNGKGCGPISLPGAENCTYFKHFTPGDESEIFEVKTQKEYNISAAAIAIFSLAFM
ILGTLCLLCSFKKGNDYILKPAGMFFAFAGLCAIISVEVMRQSVKRMIESEETIWIDYSY
AWSFACACAGFCLLFLSGLGLLLLSMPRMPQNPWESCMDAEHEVE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagcgtacgaaggtgaagatgacgttctttgtgatcctggtgggtatggcgtcc
atgtttacggcggtggtgacggaccattgggccgtgctgagcccgcgggtggagcaggtg
aacgcgacgtgtgaggcggcccactttggcctctggaggctgtgtaagaaggtcatctac
atcagtgaggcggactacaatggaaagggttgtggccccatcagcttgcctggagcggag
aactgcacttacttcaaacacttcactcctggggacgagtctgagatttttgaagtcaaa
acccagaaagagtacaatatctcggcagcggccatcgccatcttcagcctggcctttatg
atcctgggcaccttgtgtctcctgtgctccttcaagaagggaaatgactacatcctcaaa
cctgccggaatgttcttcgctttcgcaggtctgtgcgccatcatctcagtggaggtgatg
cgtcagtcggtaaagcggatgatcgagagcgaggaaaccatctggatagactactcctac
gcctggtccttcgcctgtgcctgcgccggcttctgcctccttttcctcagtggcctcggc
ctcctcctgctctccatgccccgcatgccccaaaacccctgggagtcctgcatggacgct
gaacacgaagtggagtaa
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