KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139424720
Entry
139424720         CDS       T10872                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139424720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139424720
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    139424720
 Complex B
    139424720
 Complex C
   U2 SnRNP specific factors
    139424720
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_5 DUF4523 xRRM
Other DBs
NCBI-GeneID: 139424720
NCBI-ProteinID: XP_071032914
LinkDB
Position
13:complement(25893873..25905920)
AA seq 219 aa
MDIRPNHTIYINNVNDKIKKDELKRSLYALFSQFGQVMDIVAMKTMKMRGQAFVVFKELA
SATNALRQLQGFPFYNKPMRIQYAKTDSEVISKIRGTFGDKDKKKDRKKKAQDQVANVAK
KPALGSANTNNAPTTMQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGK
HDISFVEFESEGQAGVAKDALQGFRITAQCAMKITYAKK
NT seq 660 nt   +upstreamnt  +downstreamnt
atggatattcgaccaaaccacaccatttacatcaataatgtaaatgataagatcaagaag
gatgagctgaagcggtcactctatgccctgttctctcagtttgggcaagtcatggatatt
gttgccatgaaaaccatgaagatgagagggcaggcgtttgtggtgttcaaagagcttgcc
tcggctacgaacgcactgcgtcaacttcaaggttttcctttctacaataagcccatgcgc
attcagtatgctaagacagactctgaggtgatctccaaaatcagaggcacatttggggac
aaggacaagaagaaggacaggaagaagaaggctcaagatcaagtggccaacgtggccaag
aaaccagcactgggatcagccaacacaaacaatgctccaacaaccatgcaggttccagac
aatccacccaactacattttattccttaataacctgccagaggaaacgaatgaaatgatg
ctctccatgctgttcaatcaattccctggtttcaaagaggtgcgactcgtccctggcaaa
cacgacatctcctttgtagagtttgagagcgagggccaggcgggagtggccaaagatgca
ctgcagggcttccggattacggcccaatgcgccatgaagatcacttatgccaagaagtag

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