Oceanisphaera avium: CBP12_00175
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Entry
CBP12_00175 CDS
T04855
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocm02000
]
CBP12_00175
Transporters [BR:
ocm02000
]
Other transporters
Pores ion channels [TC:
1
]
CBP12_00175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_FAM234A_B
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_CDC20-Fz
Beta-prop_BBS7
Motif
Other DBs
NCBI-ProteinID:
ART78760
UniProt:
A0A1Y0CTS2
LinkDB
All DBs
Position
33494..34663
Genome browser
AA seq
389 aa
AA seq
DB search
MILRKTFTVALLGLALSACSSQPDLRPASPLPEVANTLNTKPLWKSSVGNGVGEYYSQLS
PVVEGERIFAASRDGVLAAFDKDTGKRQWQLRIDKLAINDNQRSPRIAGGLTAAYGNLYF
GSENGVVYAVSQAEGELLWAKTVAGEVLAAPAVDEGKVVVHTSSGHLVALNSSSGEQEWQ
LRNEQPSLTLRSQATPVTAGGAVLYGRADGRLGIALLATGQPVRDTRIANPRGATELERM
VDVAAKPVILGDILFAIAYNGQLTAHQLISGQELWKRQYQGSQDLSTDGRLLFISDSRSH
LFAVDARSGMEVWSNTELENRQLTASVVFGDYLVAGDDEGYLYWFDSQTGKLKSLQRIDS
KGLYVAPVVAGNRLYVQSRSGDLLAIDQP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatattgcgaaaaacctttaccgtcgctttgctaggcttggcgctaagcgcctgctcc
agccaacccgacttgcgccccgcgagccccttgcctgaggtggctaataccttaaatact
aaaccgttatggaaaagctccgtcggtaacggcgtgggcgaatattattcccagcttagc
ccagtggttgagggcgaacgtatatttgccgcgtcgcgcgatggcgtattagccgccttt
gataaagacactggtaagcgtcagtggcagctgcgcatcgataagcttgccattaatgat
aatcaacgcagccctagaattgccggaggcttaaccgccgcctatggcaacttgtatttt
ggctcagaaaatggcgtggtttacgccgttagccaagctgagggtgagctgttgtgggcc
aaaaccgtggccggtgaagtgttagcagcgcccgccgtggatgagggcaaggtagtggtc
cataccagctccggtcatttagtggcacttaactcaagtagtggcgagcaggaatggcag
ttgcgtaatgaacaacctagcctgacattgcgcagccaagccaccccggttaccgccggt
ggcgcggtattatatggccgtgctgatggtcgcttaggcattgcgctattagcgacgggc
cagccagtgcgcgatacccgtattgctaatccaagaggtgctactgagttagagcgcatg
gtggatgtggcggccaaacccgtgattttaggcgatattctgttcgctatcgcttataat
ggccaactaactgctcatcagttaatttctggccaagaattgtggaagcgccaatatcag
ggctctcaggatctaagtacagatgggcgcttgctgtttattagcgatagccgtagtcat
ttgtttgcagttgatgcgcgcagcggcatggaagtttggtcaaataccgaattagaaaac
cgccagctgacagcttctgtggtgtttggtgattatctggtggccggtgacgatgaaggg
tatctgtactggtttgatagccaaaccggtaagttaaaatccttacaacgtattgatagc
aagggcttatatgtggctcctgtggtcgccggtaatcgactttatgtacaaagccgcagt
ggtgatttgttggccatagaccaaccctga
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