Oceanisphaera avium: CBP12_00430
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Entry
CBP12_00430 CDS
T04855
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBP12_00430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_00430
Enzymes [BR:
ocm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CBP12_00430
DNA repair and recombination proteins [BR:
ocm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBP12_00430
Prokaryotic type
CBP12_00430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ART78807
UniProt:
A0A1Y0CV84
LinkDB
All DBs
Position
95940..96614
Genome browser
AA seq
224 aa
AA seq
DB search
MIKTWQQLIEQEQQKPYLRQTLDFVEQERQAGKVIYPPAAEVFSAFTLTPLNKVKVVILG
QDPYHGPNQAHGLSFSVKPGVLIPPSLRNMYKELSTDIAGFIAPKHGYLKEWAEQGVLML
NTVLTVEQGKAHCHAKLGWETFTDKVMHTLNEQGSGIIFLLWGAHAKKKGALLDSQRHHI
LTAAHPSPLSAYRGFFGCQHFSKTNQLLSQQNQAPIRWQLSLHP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacttggcaacaacttatcgaacaagaacagcaaaagccttatctgcgccag
actctcgattttgtcgagcaagagcgccaagcgggtaaagtcatttatccgccggctgca
gaggtgttcagtgcctttaccctcactcccctaaataaagtaaaagtagtcatccttggc
caagacccgtatcacggccccaatcaagctcatggcttaagtttttcggtaaagcctggc
gttttaataccgccatcactcagaaatatgtataaagagctcagtacagatattgcgggt
tttatcgcgcctaagcacggctacttaaaagaatgggctgagcagggcgtgttaatgctt
aacacggtgcttacagtagaacaaggcaaggcacattgtcacgctaagcttggctgggaa
acctttactgataaagtaatgcacactcttaatgaacaaggctcgggaataattttttta
ttgtggggtgctcatgccaagaaaaaaggcgcgctattagatagccagcgccatcatatt
ttaacagctgctcatcccagcccattatcggcgtatcgcggcttttttggctgccaacac
ttttctaagactaaccagttgctaagccaacaaaatcaggcgcccatccgttggcagctt
agcctgcatccttaa
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