Oceanisphaera avium: CBP12_00595
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Entry
CBP12_00595 CDS
T04855
Name
(GenBank) hypothetical protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00540
Lipopolysaccharide biosynthesis
ocm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CBP12_00595
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ocm01005
]
CBP12_00595
Enzymes [BR:
ocm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
CBP12_00595
Lipopolysaccharide biosynthesis proteins [BR:
ocm01005
]
Core region
CBP12_00595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
PIG-P
TEX13B_C
Motif
Other DBs
NCBI-ProteinID:
ART78836
UniProt:
A0A1Y0CV80
LinkDB
All DBs
Position
complement(129700..130935)
Genome browser
AA seq
411 aa
AA seq
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MSQSKTKYLIINFLLSIEYIFILSPFIWLLSGVFSVPDGKSVLSKIIPIVAAYCFIRFKG
QWRKNLNNPAFKIFSISNTIIFIFVVLNHLLGSEDFSFARTLFTVQLYLTVLPWQRITAR
HLWALLILAGVVVGISALYEVLALNIPRAGSLAFNPIPYATYAAVLCLSCLMLPLILRSN
LLWIVASLLGAAGATTAIILSGTRGIWLALIVIVIMLGVQLLRQASIKKVLGIAIISTVA
IGISLTAVSDTLTQRYQQTVAEYNHMAHKDMDTSIGIRLQLWQRGLSYIKQNPLLGTGTE
QYLVNIEQDKQAGLISPIAAPLANAHFHNQFIDTLVRTGALGLLLLLAWMFIPAWTLHKQ
QQYPQRNWALACGIVMLIGGLTDVPFHHTHLVYFYSMLMGAILMTSVKSKE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatcaaaaacaaaatatttaataattaattttcttttatctatagagtatata
ttcatactaagccctttcatatggcttctctctggcgtgttcagtgtaccggacggaaaa
tcagtacttagtaaaatcatccctattgtcgccgcatattgctttatccgttttaagggg
caatggcgtaagaacttaaacaaccctgcttttaaaatatttagtataagcaacacgata
atattcatttttgtggtattaaaccatcttttaggtagtgaagactttagctttgctcgt
actttattcacagtacaactttacttaaccgtcttaccctggcagcgcataactgcacgt
catttatgggcgttattgatcctagctggagtcgttgttggcatcagtgctctatatgaa
gtattagcgctaaatataccaagagcaggaagtcttgcattcaatcccattccttatgct
acttatgcagcggttctctgtttgagctgcctgatgttaccgttaatcttgcgcagtaac
ttattatggatagtggcgagcctattaggagccgcaggtgccaccaccgctattatacta
agtggcacccgaggtatttggctggcgttgattgttattgtgatcatgctcggggtacaa
ctactacgccaagcaagtattaaaaaagtattaggcatcgctattattagtacggttgcg
ataggtattagcttaactgcagttagtgacacgcttactcagcgttatcaacaaactgtt
gctgaatataaccacatggctcacaaagatatggatacctcaataggcattcgcttacaa
ctttggcagcgtggactaagttatattaagcaaaatcctttattgggtaccggtaccgaa
cagtacttagtaaacatagagcaagataaacaagcagggctaataagccccattgcagct
cccctcgccaacgcgcattttcataatcagtttatagatactttggttagaactggtgcc
ttaggattattactattgttggcttggatgtttattcctgcttggactttacataaacag
caacagtatccacaacgaaactgggcactagcctgtggcatcgttatgctaattggcggc
ttaaccgacgtccccttccaccatactcatttagtgtatttttatagcatgctaatgggc
gcaatattaatgacctcagtgaagagtaaagaatag
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