Oceanisphaera avium: CBP12_02360
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Entry
CBP12_02360 CDS
T04855
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocm03032
]
CBP12_02360
03036 Chromosome and associated proteins [BR:
ocm03036
]
CBP12_02360
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_02360
DNA replication proteins [BR:
ocm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBP12_02360
Chromosome and associated proteins [BR:
ocm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CBP12_02360
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CBP12_02360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ART79129
UniProt:
A0A1Y0CV60
LinkDB
All DBs
Position
514418..514699
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AA seq
93 aa
AA seq
DB search
MTKSDLIERLAEQYSHLGTKEVENAIKEILEQMSVSLESGDRIEIRGFGSFSLHYRAPRQ
GRNPKTGEKVELSGKHVPHFKPGKELRERVNPS
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccgatcttattgaaagactggctgaacaatacagtcatctaggcactaaa
gaagtagagaacgccattaaagaaatccttgaacaaatgtcggtcagcctagaaagtggt
gatcgcattgaaattcgcgggtttggtagtttttctttacattaccgggcgcctcgtcaa
ggtcgcaaccctaaaacgggtgagaaagtggaattaagcggtaagcatgttccccatttt
aaaccggggaaagagctacgcgagcgtgttaatcccagctaa
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