KEGG   Oceanisphaera avium: CBP12_02385
Entry
CBP12_02385       CDS       T04855                                 
Name
(GenBank) transcriptional regulator
  KO
K03746  DNA-binding protein H-NS
Organism
ocm  Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:ocm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocm03036]
    CBP12_02385
   03400 DNA repair and recombination proteins [BR:ocm03400]
    CBP12_02385
Chromosome and associated proteins [BR:ocm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    CBP12_02385
DNA repair and recombination proteins [BR:ocm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CBP12_02385
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS MAT1 Mif2_N ALGX DUF1840 DUF2203 DUF3037 CR6_interact
Other DBs
NCBI-ProteinID: ART79133
UniProt: A0A1Y0CUW1
LinkDB
Position
complement(517532..517942)
AA seq 136 aa
MTDFLKTLLNIRSLRAATRELTLEQMEEALAKLTSVIEEQRETKEAEEADAKERERKLKE
YMDQMAADGIDLNDLLQLAEPAKKVSAPRKKRPAKYEYHDDNGDYKTWTGQGRKPSPIKN
AIDSGSKTLEDFLIKE
NT seq 411 nt   +upstreamnt  +downstreamnt
atgacagactttctgaaaaccttattaaacattcgtagcttgcgcgccgctactcgtgaa
cttaccctagagcaaatggaagaagcgctagcaaaacttacgagcgtgattgaagaacaa
cgtgaaacaaaagaagcagaagaagcggacgcaaaagagcgcgagcgtaaattaaaagaa
tatatggatcagatggcggcagacggcattgatttaaatgacttactgcaattagctgag
ccggctaaaaaggtaagtgctcctcgtaaaaagcgccctgctaagtatgaataccatgat
gacaatggcgactataaaacgtggactggtcaaggccgcaagccctcgcctattaaaaat
gccattgatagcggcagcaaaaccttagaagacttccttattaaagagtaa

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