Oceanisphaera avium: CBP12_02385
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Entry
CBP12_02385 CDS
T04855
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocm03036
]
CBP12_02385
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_02385
Chromosome and associated proteins [BR:
ocm03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CBP12_02385
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBP12_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
MAT1
Mif2_N
ALGX
DUF1840
DUF2203
DUF3037
CR6_interact
Motif
Other DBs
NCBI-ProteinID:
ART79133
UniProt:
A0A1Y0CUW1
LinkDB
All DBs
Position
complement(517532..517942)
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AA seq
136 aa
AA seq
DB search
MTDFLKTLLNIRSLRAATRELTLEQMEEALAKLTSVIEEQRETKEAEEADAKERERKLKE
YMDQMAADGIDLNDLLQLAEPAKKVSAPRKKRPAKYEYHDDNGDYKTWTGQGRKPSPIKN
AIDSGSKTLEDFLIKE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgacagactttctgaaaaccttattaaacattcgtagcttgcgcgccgctactcgtgaa
cttaccctagagcaaatggaagaagcgctagcaaaacttacgagcgtgattgaagaacaa
cgtgaaacaaaagaagcagaagaagcggacgcaaaagagcgcgagcgtaaattaaaagaa
tatatggatcagatggcggcagacggcattgatttaaatgacttactgcaattagctgag
ccggctaaaaaggtaagtgctcctcgtaaaaagcgccctgctaagtatgaataccatgat
gacaatggcgactataaaacgtggactggtcaaggccgcaagccctcgcctattaaaaat
gccattgatagcggcagcaaaaccttagaagacttccttattaaagagtaa
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