Oceanisphaera avium: CBP12_03320
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Entry
CBP12_03320 CDS
T04855
Name
(GenBank) phenylalanine--tRNA ligase subunit alpha
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBP12_03320
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocm01007
]
CBP12_03320
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocm03016
]
CBP12_03320
Enzymes [BR:
ocm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CBP12_03320
Amino acid related enzymes [BR:
ocm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CBP12_03320
Transfer RNA biogenesis [BR:
ocm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBP12_03320
Prokaryotic type
CBP12_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA_synthFbeta
DUF3813
Motif
Other DBs
NCBI-ProteinID:
ART79293
UniProt:
A0A1Y0CVC9
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All DBs
Position
735885..736868
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AA seq
327 aa
AA seq
DB search
MDQLQDVIVKAQAEILAVATAAELDDIRVHYMGKKGIFTEQSKALGKLSAEERPAAGQVI
NRAKQAVNDALNSKREALQLAELNQKLASETLDISLPGRRQAIGGLHPVSRTIKRIESFF
GELGFQVAEGPEIEDGFHNFDALNIPAHHPARADHDTFYFNPDLMLRTQTSGVQIRTMQH
QTPPIRIISPGRVYRNDYDQTHTPMFHQVEGLLVDEHVSFAQLKGVLHDFLHNFFEEDLE
IRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRSVGIDPERYSGFAFGMGVE
RLTMLRYGVNDLRAFFENDLRFLKQFS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggatcagctgcaagacgtaatcgtcaaagcacaggcggagatcctggccgtcgccacc
gccgccgagctggatgacatccgggtgcactatatgggtaaaaaaggcatttttaccgaa
caatcaaaagcactgggtaagttgtctgccgaagagcgcccggctgcgggtcaagtgata
aaccgtgccaagcaagcggtgaatgatgcgctaaatagcaagcgtgaagcgttgcagctt
gccgagttaaatcaaaaattggcctcagaaaccttagatattagtttgcccgggcgtcgc
caagcgataggcggactgcatccggtgagccgtactattaagcgtatcgagtcttttttt
ggcgagcttggttttcaagtggctgaaggtccagaaattgaagacggttttcataatttt
gatgcgctcaatattcctgcacaccaccccgcgcgcgctgatcatgacaccttttatttt
aatcccgacttaatgctgcgcactcaaacctcgggcgtgcaaattcgcaccatgcaacat
caaacgccacctattcgcattatttcgccaggtcgcgtctatcgtaacgattacgatcaa
actcatactcccatgttccatcaagtggaagggctcttggtcgatgaacatgtcagcttc
gctcaattaaaaggcgtgttgcatgactttttgcataacttcttcgaagaagatttagaa
attcgttttcgtccctcctacttcccctttaccgagcccagcgccgaagtggacgtgatg
ggtaaaaacggtaaatggctagaagtgttaggttgcggcatggtgcacccgaatgtgctg
cgctcggtgggcatagatcctgaacgctacagcggttttgcctttggtatgggcgtggag
cgactcactatgttgcgttatggcgtgaacgacttgcgtgcctttttcgaaaacgactta
cgttttcttaagcaatttagttaa
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