Oceanisphaera avium: CBP12_03325
Help
Entry
CBP12_03325 CDS
T04855
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBP12_03325
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocm01007
]
CBP12_03325
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocm03016
]
CBP12_03325
Enzymes [BR:
ocm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CBP12_03325
Amino acid related enzymes [BR:
ocm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CBP12_03325
Transfer RNA biogenesis [BR:
ocm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBP12_03325
Prokaryotic type
CBP12_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ART79294
UniProt:
A0A1Y0CWA6
LinkDB
All DBs
Position
736884..739271
Genome browser
AA seq
795 aa
AA seq
DB search
MKFSTTWLDEWVNPGLSKEVLAELITMAGLEVDGIEPVAGDFNQVVVGEVVECAQHPDAD
KLQVTKVNVGHDELLDIVCGAPNCRTGLKVAVAVVGAVLPGDFKIKKAKLRGQASNGMLC
SYGELGIDLDSSGIIELPQDAPIGECVREYLQLNDSIIEIDLTPNRADCLSMAGVAREVG
VLTQTAVNWPEINAVPTAIEESVAINVSAPDACPRYLSRVVKNINMNATTPLWMQEKLRR
SGLRAIDPVVDVTNFVLIEWGQPMHAFDLSTLSGDINVRLAEQDEKLVLLDGQEVSLNSD
TLVIADNEQAIAMAGIFGGKATGVTDTTQDVLLECAFFNPLAITGRARSYGLHTDSSHRF
ERGVDYQLQQKVMERATALLLDICGGQAGPIVEAVSESHLPSAKKVTLRHSKLNSTIGIE
IDAEQVTDMLSRLGLNVTKTAEGWQAQVPSYRFDISIEEDLIEEVARVYGYNNIPNQAPV
AGLTMSKHSEARLPLNRLKEALVDLGYQEAITYSFVDPAQQQLLFPNVKAMVLPNPIAAD
MSAMRVSLWPGLIQAAVYNQNRQQSRLRFFEQGLTFVPDDNAENGVKQTPKLAGLIMGTV
HGEHWDISQKAADFFDIKGDLESLIAISGHELDFSLVRTDITSLHPGQAAAVLYKGQEVG
VLGTLHPSLLKKLGLKSQAYVFEIELSALTQRHVPEAVEISRFPANRRDLALVVNTEVAA
GDILDLVRKVGGNQLVGLNLFDVYQGEGISDNKKSLALSLILQDTHRTLEEKEIADTVAR
IVSALSDEFSASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcaacaacatggctagatgagtgggtaaacccaggtctaagcaaagaagta
ctggctgagctcattaccatggcgggtctggaagtcgatggcattgaacccgtcgccggt
gattttaatcaagtggtcgtaggggaagtggtggaatgcgcccaacaccccgatgctgat
aaattacaagtgaccaaagtcaatgtcggtcatgatgaattactcgatatcgtgtgcgga
gcgcctaattgtcgcactggcttaaaagtggcggtcgccgtggtcggtgcggtgttaccg
ggtgattttaaaattaaaaaagccaagctgcgcggtcaagcctctaatggcatgctgtgc
tcttatggtgagctgggcatcgatctcgactctagcggtattattgaactgcctcaagat
gcccctattggcgaatgtgttcgcgagtacttgcagcttaatgacagcatcattgagatt
gatcttacgcctaatcgcgccgattgcttaagcatggccggtgtcgctcgtgaagtgggt
gtgttaacgcaaactgctgttaactggccagagattaacgccgtgcctaccgctattgaa
gaaagcgtagccatcaatgtaagcgcaccggatgcctgccctcgttatttatcgcgagtg
gttaaaaatattaatatgaatgccaccacaccactatggatgcaagaaaaactgcgtcgt
agcggcctgcgcgcgattgaccctgtggtcgatgtcactaactttgtgctgattgagtgg
ggccagccgatgcatgccttcgatctaagcactcttagtggcgacattaatgtgcgctta
gctgaacaagatgaaaagctagtgctactcgatggccaagaagtgagcttaaatagcgac
accttagtgattgccgataacgagcaagccattgcaatggcgggtatttttggtggtaaa
gccacaggagtaaccgacactactcaagatgtattattagagtgcgcgttttttaatccg
cttgccattacgggacgcgcgcgcagttatggtttgcataccgactcttctcatcgcttt
gagcgcggcgtagattatcagctgcaacaaaaagtgatggagcgtgcgactgccttattg
ctcgacatttgtggtggccaagcagggccgatcgtggaagctgtctctgagtcacactta
cccagcgccaaaaaagtcactttgcgccatagcaagctaaatagcaccatcggcattgag
atcgatgccgagcaagtgaccgacatgctcagccgccttggcttaaacgtgaccaaaaca
gccgagggctggcaggctcaagtgccgagttatcgctttgatatcagcatcgaagaagac
ttgatagaagaagtagcccgagtctatggctataacaatattcctaatcaagcgccggtg
gcgggcttaactatgtctaaacatagtgaagctaggctgccccttaatcgcttaaaagaa
gcattggttgatttaggttatcaagaagccattacttatagctttgtagatcccgcacag
cagcaattattattccctaacgttaaggccatggtgttacctaaccccatagccgcggat
atgtcagcaatgcgggtgtctttatggcctggattaattcaagcggcggtatataaccaa
aatcgccagcaatcgcggttacggttttttgaacaagggctgacttttgtacccgatgac
aacgctgaaaacggcgttaagcaaacgcctaaattagcagggctaattatgggcactgtg
catggtgagcattgggatattagccaaaaggcggctgatttttttgatattaagggcgat
ctagaatcactgattgccattagtggtcatgaattagactttagcctagtgcgcaccgat
atcactagcctgcaccccggccaagcagccgctgtgttatataaaggccaagaagtaggg
gtactaggcaccttacaccctagcttattaaagaaacttgggcttaagtcacaagcctat
gtctttgaaattgagcttagcgcacttactcagcgccatgtgcccgaagccgttgaaata
tcgcgcttccccgctaatcgtcgcgacttagcattggtagtaaatactgaggtagctgca
ggcgatatccttgatttagttaggaaagttggcggaaatcaattggttggcttaaacttg
ttcgacgtataccaaggtgagggtattagtgacaacaagaagagcttagcgcttagcttg
atattgcaagatacgcatcgtaccttggaagaaaaagaaattgccgatacagttgcacgc
atcgtttcggcactttcggatgagttcagtgcatccttgagggattaa
DBGET
integrated database retrieval system
