Oceanisphaera avium: CBP12_03705
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Entry
CBP12_03705 CDS
T04855
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocm03009
]
CBP12_03705
Enzymes [BR:
ocm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CBP12_03705
Ribosome biogenesis [BR:
ocm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CBP12_03705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
TGS
Motif
Other DBs
NCBI-ProteinID:
ART79363
UniProt:
A0A1Y0CVK2
LinkDB
All DBs
Position
complement(814948..815904)
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AA seq
318 aa
AA seq
DB search
MKPEQQHSVQLLTIDDEYQGQRIDNFLRTQLKGVPKTLIYRIVRKGEVRVNKKRIKPEYK
LQAGDVVRIPPVRVAERAAPVPANKLDEVQPLEAAILYEDEALLIINKPAGMAVHGGSGL
SYGLIEGLRALRPEARFLELVHRLDRDTSGLLLVAKKRSMLRNLHEQLREKTVEKHYFAL
VAGHWPAKQRAIKAPLRKIELPSGDRVVSVDTREGKASDTRFRIVQQYEQATLLDCSPIT
GRTHQIRVHTLAGGHPIAGDNKYGDQEFDSQMRQLGLTRLFLHACRLRFFHPVTQEQMTI
EAPLEPSLETLLTKLKKR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagaacaacagcatagcgtacaactgctcactatagacgatgaatatcaaggg
cagcgcatcgacaactttttacgtacccaactcaaaggggtccctaaaactctcatttac
cgaattgttcgcaaaggcgaagttcgcgttaataaaaagcggattaaaccggagtataaa
ctacaggccggagatgtggtgcgtatcccacccgtgcgggtagccgagcgcgccgcgccg
gtgcctgctaataagttagatgaggtacagcccctagaggcggccattttatatgaagat
gaagcgctacttattattaataagccggccggcatggcagtacatggcggcagtggctta
agttatggcttaattgaaggcttgcgtgcgctgcgccctgaggcgcgttttttagaacta
gtgcatcgcttggaccgagatacctcgggcttattgctcgtggcaaaaaagcgcagtatg
ttgcgcaatttgcatgagcagctgcgagaaaagaccgttgaaaaacactactttgcactg
gtagcagggcactggccggcaaaacaacgagccataaaagcgcccttaagaaaaatagag
ctgccctcaggtgatcgcgtggtaagtgtagatacccgagaagggaaagcttcagatact
cgttttcgaattgttcaacaatatgaacaagccacgttacttgattgcagccccatcact
gggcgcacgcatcaaattcgagtgcataccttagccggcggccatcctattgccggtgat
aataaatatggggatcaagagtttgatagccaaatgcgccagctcggtctgacgcgatta
tttttacatgcctgtcggttgcgctttttccacccagtgactcaagagcagatgaccata
gaagcgcccttagagccaagtttagaaacactgctgactaagttgaaaaaaagatga
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