KEGG   Oceanisphaera avium: CBP12_04360
Entry
CBP12_04360       CDS       T04855                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ocm  Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:ocm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ocm02048]
    CBP12_04360
Enzymes [BR:ocm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBP12_04360
Prokaryotic defense system [BR:ocm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CBP12_04360
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 DEAD Cas3_HD ResIII
Other DBs
NCBI-ProteinID: ART79478
UniProt: A0A1Y0CW87
LinkDB
Position
complement(960653..964060)
AA seq 1135 aa
MMVIFVSQCEKKALPRTRRVLDAFANRIGDNTWQTLITEEGLLTVRKMLRQTASKSTAVS
CHWIRSRSRSQLRWIVGNKKKFNNEGVVAVNSTEQDLLTNDAEKNWKYLPLIKAFTGLAA
LLHDWGKATKLFQDKLQPASKASFKGDPLRHEWISSLLIMALVKTGEEPEHDSSWLAPLL
NQSINEQQLAAALPQLKAEHAPFSSLPDAATLLLWLVLSHHRLPKPENKASFGDRENSNP
QQLLARLSKEWGYENLCRKDEDAAQYQKRLQDCFVFPQGLLSKSQHWLNALSHRARQLEA
HLPLFAQAVQDGSWRTIAHHARLCLMVGDHYYSSQAAAFNWPNTVNLFANTHSAGPEQGQ
LKQQLDEHLVNVANIAVNTCRMLPRFERDTPKAEDVQQLKPSKKLAPAIKKQFGWQDKAV
TAIKEYRQENDDNIGGYFIVNMASTGRGKTLANAKIMQALSDDQQSLRFILALGLRTLTL
QTGDEYRDRIGLADNELAVLIGSQAILELHQGSSKEHKKEVQPLAGEDYGSESIDPLLDK
QEDVIGFNKNEDDDDRWQNILPEDELTTVLTGRKERALLYAPVLACTIDHMMAATETTRG
GRYILPSLRLMSSDLVIDEIDDFTGEDLVAIGRLIFLAGMLGRKVMISSATIPPDLALSY
FIAYQKGWALFAASRHQRSQVACGWTDEFNSQLVTVNQGEAATVNYQAAHQAFIKKRVTK
LRAEPVKRRGEIIPLAEPMADESHELSYFSAIQQAVLAKHHQHHQQDNKTGRQVSFGVVR
CANILPCVSLTEYLLDAVWPEEVTVRVMAYHSQQVLLLRHAQEQHLDQVLKRKTPVNDPE
GVFQHPIIRQHLDSGDSKQLIFILVATPVEEVGRDHDFDWAVVEPSSFRSIIQLAGRVRR
HRDAEPNNEVPNMGLLQFNLKGYRGEPKNVFSRPGYEQDDMQLFSRNLSDLVDEAALKRC
VDATPRMFKDSKIQLAALEHHAIGRTLGCHYLKGEQTPKDDPAQSPKSLWGYTDDYWWMT
ALPQQFNQFRRSDPGLNLYCVIDEQGRSRFQIYDRNSGWVECEKLLGIAHQPLSEQRMAR
LWLVRDYGTLIAEQSALREEDLERTSQRLGEISLQYYKDGNRYRYNEQLGLVRLK
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgatggtgatctttgtttctcagtgcgaaaagaaagctctgcccagaactcgtcgggta
ttggatgcctttgctaaccgcattggcgataacacctggcaaacgctgatcaccgaggaa
ggtttgctgacggttcgaaaaatgctgcgccagactgccagcaaaagcaccgccgttagc
tgccactggatacgctcgcgctcgcgcagtcagttgcgctggattgtaggtaataaaaag
aaatttaataatgagggcgtggtggcggtgaacagtactgaacaggatttactgacaaat
gatgcagagaaaaactggaaatatctgcccttgatcaaggcctttaccggcctggcggca
ctattgcatgattggggcaaagcaacaaaattatttcaggataaattgcagcctgcttct
aaagcaagctttaaaggcgaccccttacgtcatgagtggatctccagtctgctaattatg
gcactggtgaaaaccggtgaggagcctgaacacgatagcagctggttggcacctttatta
aatcagtccattaacgagcagcaactggcggctgctttaccacaattaaaagcagagcat
gcgccttttagcagcctgcctgatgcggcaaccttgctactctggttggtactgtcccat
catcgattgcctaagcctgaaaataaagccagttttggcgaccgagaaaacagcaatcca
cagcagctgctggctcggctcagtaaagaatggggctatgaaaatctgtgtcgtaaagat
gaggacgctgctcagtaccagaagcgtttacaggattgctttgtttttccacaggggctg
ttatcaaaatcccagcactggttgaatgcgctcagtcacagagcccgacagctagaagcg
catttgcctttatttgcgcaggcggtacaggatggcagctggcgtaccattgcccaccat
gctcggctttgcctgatggtgggcgatcactattattcctcacaggctgcggcatttaac
tggccgaataccgttaacttgtttgctaatacccacagtgctgggccagagcaaggacag
cttaagcaacagcttgatgagcacttggtgaatgtggctaatattgccgttaatacctgt
cgtatgttgccgcgttttgagcgtgacacgccaaaggcggaagatgtgcaacagctcaaa
ccctcgaaaaaattagcccctgccatcaagaaacaatttggctggcaagataaagccgta
acagccattaaagaatatcggcaagagaatgacgataatatcggcggctactttatcgtc
aatatggccagcactgggcggggtaaaaccttggctaacgccaaaatcatgcaagcctta
tctgatgatcaacaaagcctgcgctttattctagccttgggcttaaggacgttaaccctg
caaactggcgatgaatatcgtgatcgtattggtttggccgataatgagttagcggtatta
atcggttcgcaggctattttagaactgcatcaaggctctagcaaagaacataagaaagaa
gtccaacctcttgcaggggaagattacggttcggaatcaatcgatcctttgctagataag
caagaagacgtaattggttttaataagaacgaggatgatgatgatcgctggcaaaatata
ctgccagaagatgaattgaccacagtcctgactgggcgcaaagagcgtgccttgctctat
gcccccgtattggcctgcaccattgatcatatgatggcggcgaccgaaaccacccgaggc
gggcgctatattctgcccagtctgcgcctaatgtcttctgatctggttattgatgagatt
gacgactttaccggtgaagatctggtggccattggccgcctgatttttctggcgggcatg
ctggggcgcaaagtcatgatttcgtcggccaccataccgccagatttggcgctgagttac
tttattgcctatcaaaaaggctgggcgctgtttgctgccagtcgtcatcaacgtagccaa
gtggcttgtggctggaccgatgaatttaactctcaactggttaccgttaatcagggcgaa
gcggcgacggttaactatcaggcagctcatcaggctttcatcaaaaagcgtgtcaccaag
ctgcgtgccgagccggttaagcgccgtggagaaattatcccactcgctgagcctatggca
gatgaaagccatgagttgagctatttttctgctattcagcaggcggtgctggctaaacat
catcagcatcatcaacaagataataagactggtcgtcaggtttcttttggtgtggtgcgc
tgcgccaatattttaccttgtgtctccttaaccgaatatttattagatgcggtttggcca
gaagaggtaacggtaagagtgatggcctatcacagtcagcaagtgctcttattgcgtcac
gctcaagagcagcatttggatcaggtgttaaaacgaaaaacgcccgttaatgatccagag
ggcgtctttcagcatccgattatccgccagcatcttgatagcggtgatagcaaacaactc
atttttattttagtggccacaccggttgaagaagtagggcgcgaccatgattttgattgg
gcggtggtggagccgtcttcttttcgctcaattattcaattggcgggtcgagtgcgccgt
catcgcgacgccgagccaaataatgaagtccccaatatgggattgttacagttcaacttg
aaaggctatcgaggtgagccaaaaaacgtctttagtcgaccgggttatgagcaagatgat
atgcagctattttctcgaaacttgtctgatttagttgatgaagctgcactcaagcgctgt
gtggatgcgacgccgcgaatgtttaaagactccaagatacagcttgccgcactggagcac
cacgccattggtcggacattgggctgccattatcttaaaggcgaacaaacgcctaaggat
gatccagcacaaagcccgaaaagcctgtggggctataccgatgattactggtggatgacg
gcgctacctcagcagttcaaccaatttcgtcgcagcgatcctgggctcaatctttactgt
gtcatcgatgaacaaggtcggtcgcgttttcaaatttatgatcgaaatagtggttgggtg
gagtgtgagaagttgctcggtattgcgcatcaaccgttaagtgagcaaaggatggcgcga
ctttggttagtacgtgactacgggacattaattgccgagcaaagcgcactaagggaagaa
gacctagagcgcacctctcagcggctaggtgaaattagcctgcagtattacaaagacggg
aatcgctatcggtataacgagcagttggggctggtgaggctcaaataa

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