Oceanisphaera avium: CBP12_04535
Help
Entry
CBP12_04535 CDS
T04855
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocm03032
]
CBP12_04535
03036 Chromosome and associated proteins [BR:
ocm03036
]
CBP12_04535
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_04535
DNA replication proteins [BR:
ocm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBP12_04535
Chromosome and associated proteins [BR:
ocm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CBP12_04535
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CBP12_04535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Barstar
Motif
Other DBs
NCBI-ProteinID:
ART79505
UniProt:
A0A1Y0CXE3
LinkDB
All DBs
Position
complement(1002952..1003227)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSQLIDKIAEGADITKAAAGRALDAFVDAISETLQEGESVSLVGFGTFSVRERAARTG
RNPQTGAAIEIAAAKTPGFKAGKTLKDAVNN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatcgataagattgccgaaggcgctgatatcactaaagcggcg
gctggccgtgctttggatgcatttgttgacgctattagcgaaaccttgcaagaaggcgag
tctgtttctttagtgggctttggtactttttctgtgcgcgagcgtgcggcacgtaccggt
cgtaacccacaaacgggtgcagctattgagatcgcggcggctaaaacccccggttttaaa
gcaggtaaaacactaaaagatgcggtgaataattaa
DBGET
integrated database retrieval system
