Oceanisphaera avium: CBP12_04965
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Entry
CBP12_04965 CDS
T04855
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_04965
Enzymes [BR:
ocm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CBP12_04965
DNA repair and recombination proteins [BR:
ocm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CBP12_04965
Prokaryotic type
CBP12_04965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ART81104
UniProt:
A0A1Y0D188
LinkDB
All DBs
Position
complement(1085047..1086537)
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AA seq
496 aa
AA seq
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MRHLVWFRSDLRVADNPALFEACVNGATVSAIYIDCLEQWQSHGRSAIQRDFLSRHLQAL
SAELSQLGIDLTLLEVARFSDVPQCLAAWLAKHPHDALYANREIAIDERRRDKAVQAHLK
NTPSIHVFNGDCVFNPGSLTTQSGDMYKVFTPFSKTWLAQLRASGFRLLPPPNAQAKPLT
PRDIELKGERVSSNHWPCGERAAAQRLAQFCESHLYDYGHARDYPAVAGTSGLSPYLALG
VLSPNQCLAAIEQQLGFLPMSRGEQGFAWLNELIWREFYRHLMVAFPQLSMNRAFKPDTE
GLQWSQDSGAFQAWCQGQTGYPIVDAAMRCLNATGWMHNRLRMIVASFLTKDLHLSWRQG
EDYFMSCLIDGELAANNGGWQWAAGTGADAAPYFRVFNPTTQGERFDGKGEFIRQWLPEL
ADVPTKYIHSPHDWLNQHQPAHQYPAPIVDHKRARLHAIAMFDALKDNSREHLSPHELSA
QQQAQAMLKELDQEVI
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatttagtatggtttagatccgacttgcgagtagctgataacccagcacttttc
gaagcttgtgtaaacggcgccaccgtcagtgctatttatattgactgcctagagcagtgg
caaagccatgggcgaagtgccatacaaagggattttttaagtcgccatttacaggcactc
agtgcagagctaagccaattaggaattgatttgacgctcttagaggtagcgcgatttagt
gacgtgcctcagtgcttagccgcttggctggctaaacatccacacgatgccctttatgct
aatcgtgagattgcgattgatgaacgccgtcgcgataaagcggtacaagcgcatttaaaa
aacaccccgtcgatacacgtatttaatggagactgcgtttttaaccctggcagtctgact
acccaaagcggcgatatgtataaggtatttacgcccttttcaaaaacttggttggctcaa
ttacgcgcctcaggttttcgcttattaccgcctcctaatgcgcaagctaagccgctaact
cctagagatattgagctaaaaggtgagcgagtcagtagtaaccattggccttgtggcgag
cgagccgcagcccaacgcttagcacaattttgtgagtcgcacttatatgactacggtcat
gcgcgagactacccagcggtggcaggcaccagtggtttatcgccctatttagcgctgggc
gttctttcacctaatcaatgcttagccgctattgagcagcaactgggttttttacctatg
agtcgtggggagcaaggatttgcgtggttaaacgagctgatttggcgagagttttatcgt
catctaatggtcgcttttccgcaattatcaatgaatcgtgcttttaagcccgacactgaa
ggcttgcaatggagccaagatagcggcgcttttcaagcgtggtgccaaggccaaactggc
tatcctattgtggacgcggcgatgcgctgccttaatgctactggttggatgcataaccgt
ttgcgcatgatagtggcgagttttcttactaaagatctgcatttaagctggcgtcaaggc
gaagactattttatgtcgtgcttaattgatggcgagctggcagctaataatgggggatgg
cagtgggcggccggtaccggtgcggatgcggctccttattttcgagtttttaatcccacc
acccaaggtgagcgctttgatggaaagggtgagtttattcgccaatggctgcctgagctt
gccgacgtgcccactaaatatattcatagtcctcatgattggctaaaccaacatcaaccc
gctcatcagtatccagcaccgattgtggatcataaacgcgctcgtctacatgccatcgcc
atgtttgatgccctaaaagataacagccgtgagcatttatcgccccatgagttaagtgca
caacagcaagcccaagccatgcttaaagaactcgatcaggaggtgatatga
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