Oceanisphaera avium: CBP12_05010
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Entry
CBP12_05010 CDS
T04855
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP12_05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocm03019
]
CBP12_05010
03016 Transfer RNA biogenesis [BR:
ocm03016
]
CBP12_05010
Enzymes [BR:
ocm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CBP12_05010
Messenger RNA biogenesis [BR:
ocm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBP12_05010
Transfer RNA biogenesis [BR:
ocm03016
]
Prokaryotic type
tRNA degradation factors
CBP12_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
KH_SLS1_2
S1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
aRib
Ferritin
Motif
Other DBs
NCBI-ProteinID:
ART79591
UniProt:
A0A1Y0CW82
LinkDB
All DBs
Position
complement(1094659..1096833)
Genome browser
AA seq
724 aa
AA seq
DB search
MNPIVKTFQYGQHTVTLETGVIARQASGAVMASIDDTAVLVTVVGKREADESKDFFPLTV
NYQERTYAAGRIPGSFFKREGRPSEGETLTSRLIDRPIRPLFPDGFKNEVQVIATVVSVN
PEISPDIIALLGTSAALAISGMPFAGPIGAARVGYINGEYVLNPTATELSNSDLDLVVAG
TANAVLMVESEANILPEEVMLGAVVYGHEQLNSAITAIKEFAAQVATPSWNWQPKAENLS
LKAQVAELASDEVGQAYRITDKTARRDALSAIKTKVLNAIATSHPEQDSKEVVEQFSALE
KHIVRGRVVRGEPRIDGREPDMIRALDVATGLLPRTHGSALFTRGETQALVVATLGTQRD
AQLIDELTGTRTDNFMLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVAAVMPSVDVF
PYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEDENFVVLSDI
LGDEDHLGDMDFKVAGTTEGITALQMDIKIEGITKEIMGAALTQARNARLHILNVMDEAL
QSPREEISDFAPRIHIIKINPEKIRDVIGKGGATIRALTEETGTTIELDDDGTVKIAAVD
GDAAKLAISRIQQLTAEVEPGTIYQGQVVRLADFGAFVNILPGKDGLVHISQITEERVKN
VSDHLSVGDTVAVKVLEVDRQGRIRLSIKEAKEPVAPTEPTEAGETQPVTPETPATDNND
TPTQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcgtaaaaacctttcagtatggtcaacataccgtcacgctagaaaccggc
gttattgcccgtcaagccagtggcgctgtaatggccagcattgatgacacagccgtatta
gtaacggtagtgggcaaacgagaagccgatgaaagcaaagactttttcccattaacggtt
aactatcaagaacgtacttatgcggccggtcgtatcccaggcagcttttttaagcgcgaa
ggccgtccatcagaaggtgaaacgctaacttcacgtttaattgaccgtcctattcgtcct
ttatttcctgatggttttaaaaacgaagtacaagttattgccaccgtggtctcggtaaat
ccggaaatttctcctgatattattgcacttttgggtacttctgcggcgctggctatttcg
ggcatgccttttgccggtccgattggtgccgcgcgcgtgggttatattaatggtgaatat
gtattaaaccccaccgccactgagctaagtaacagtgatcttgacctagtggtcgctggt
acggctaatgccgtgctgatggtggagtctgaagccaatattttgccagaagaagtcatg
ctgggtgccgttgtatatggtcatgagcaattaaatagcgccattacggctattaaagaa
tttgccgcccaagtagctactccttcttggaattggcagccaaaagctgaaaacctgagc
ttaaaagctcaagttgcagagttggcaagcgatgaagtagggcaagcgtatcgcatcact
gataaaacggcgcgtcgtgatgcactgagtgctattaaaactaaggtacttaatgcgatt
gccaccagtcatcctgagcaagatagcaaagaagtggtagagcaattctctgcacttgag
aagcacattgtacgcgggcgagtagtccgtggcgaaccccgtatcgatggtcgtgaaccc
gatatgatacgggcactggatgtggcgactggtttattaccgcgcactcacggctcggca
ttgtttacccgtggtgaaactcaagccctagtggtggccactctcggtactcagcgcgat
gcgcaattaattgatgagttaactggcacccgcactgataattttatgctgcactataac
ttccctccttattgtgtgggtgagaccggcatggtgggtagtcctaaacgccgtgaaatt
ggtcatggtcggttagcgaagcgcggtgtagctgctgtgatgcccagtgtcgatgttttc
ccctacacagtacgtgtggtgtcggaaatcaccgaatcaaatggctcttcctctatggct
tccgtgtgtggtacttcattagcactaatggatgccggcgtgcctattaaagcctcggtg
gcgggtattgccatgggtctagttaaagaagatgaaaacttcgtggtcttgtctgatatt
ttaggtgatgaagaccacttaggtgacatggactttaaagtagccggtactacggaaggt
attactgcgctgcagatggacattaagattgagggcattactaaagagatcatgggtgcg
gcactgacccaagcgcgtaatgcgcggttacatatcctaaatgtgatggacgaagcgctg
caaagcccacgggaagaaatttctgattttgctccgcgcattcatattattaagatcaac
cctgaaaaaattcgtgatgttattggtaaaggcggcgccactattcgtgcgctcaccgaa
gaaaccggcactaccattgagttagatgatgacggtaccgtaaaaattgctgctgtggat
ggtgacgccgctaagcttgctattagtcgtattcagcaactaacggcggaagtagagcct
ggcaccatttatcaagggcaagtggtacgtttagcggattttggtgcttttgtgaatatc
ttgccaggcaaagatggcctagtgcatatctcacaaattaccgaagagcgcgtgaaaaac
gtctctgatcatctcagtgtgggtgacacggtagcggttaaggtattagaagtggatcgt
caaggccgcattcgtttatcaattaaagaagcgaaagagcctgttgcgcccactgagcca
actgaagctggcgagactcagcctgtgacaccagaaacaccggctacagacaataatgat
acgccaactcaataa
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