Oceanisphaera avium: CBP12_06335
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Entry
CBP12_06335 CDS
T04855
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm03030
DNA replication
ocm03430
Mismatch repair
ocm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP12_06335
03430 Mismatch repair
CBP12_06335
03440 Homologous recombination
CBP12_06335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocm03032
]
CBP12_06335
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_06335
Enzymes [BR:
ocm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBP12_06335
DNA replication proteins [BR:
ocm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBP12_06335
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBP12_06335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
His_kinase
DUF3192
Motif
Other DBs
NCBI-ProteinID:
ART79816
UniProt:
A0A1Y0CY54
LinkDB
All DBs
Position
1381663..1382682
Genome browser
AA seq
339 aa
AA seq
DB search
MRLYPEKLAHHLQAGLAPCYFIYGDEPLLKLEALDMLRQCARNNGFDDHLRFDAPNLEWD
DIFSASQSLSLFSQRQIIELALPEKLDKNSAQRLGELLKQCHPDLLLLITGPKLNQQQQK
SAWFSAISQAGPVILVNTPEGSHWLRWLQQRIKQHGLQIDNDGVQWLSLAFEGNLLALNG
ELEKLALQQLPSPLSLALLQEQVQPHHQFNPFQLFDPLLEGKVKRATRILLQLRAEGIEA
GMLCHLFARELTPLIHMQLGLTAGQSFSKLAAELHIWSSRQGLVQSALQRLPLAKLQQLQ
AMLGAADVAVANFEEDEAWRWLYSLCVGFLDGKKMGINP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttatatcctgaaaaactggcacatcatcttcaagcagggctcgcgccctgctat
tttatttatggcgatgaaccgcttcttaagttagaagcgctggatatgctgcgccaatgc
gcgcgtaacaatggctttgatgatcatcttcgctttgacgcacccaacctagagtgggac
gacatatttagcgccagccaatcattaagtttatttagccagcgacaaattatcgaacta
gcacttcccgaaaagctggataaaaacagcgcccaacgactgggcgagttacttaagcaa
tgtcatcccgacttattacttctcatcaccggccctaaactaaatcagcaacaacaaaaa
agcgcttggtttagtgccattagccaagcaggccctgtgatactggtgaatacccccgag
ggcagccattggctacgctggctacagcagcgcatcaaacaacatggcttacaaatagat
aatgatggcgtgcaatggctaagcttagcgtttgaagggaatttattagcactaaatggc
gagcttgaaaagctcgccttacagcaattaccctcgccattaagtttggcgctgttacaa
gaacaagtgcagccccatcatcaatttaatccctttcaattatttgacccgctgttagag
ggcaaagttaagcgcgccacgcgaattttactgcaactgcgcgccgaggggattgaagcg
ggcatgctatgtcatttatttgcccgtgagctcacccctttaatacacatgcagctgggc
ttaacggcaggacagtccttttctaagttggcggccgagctgcatatttggtctagccgc
caaggcttagtacaaagcgcactgcagcgcctgccgttggctaagctacaacaattacaa
gctatgttaggggcggccgatgtggcggtagccaattttgaggaagacgaagcgtggcgc
tggttatatagcctctgcgtgggatttttagatggcaagaagatgggaattaatccataa
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