Oceanisphaera avium: CBP12_06845
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Entry
CBP12_06845 CDS
T04855
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00250
Alanine, aspartate and glutamate metabolism
ocm00310
Lysine degradation
ocm00350
Tyrosine metabolism
ocm00650
Butanoate metabolism
ocm00760
Nicotinate and nicotinamide metabolism
ocm01100
Metabolic pathways
ocm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CBP12_06845 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CBP12_06845 (gabD)
00310 Lysine degradation
CBP12_06845 (gabD)
00350 Tyrosine metabolism
CBP12_06845 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CBP12_06845 (gabD)
Enzymes [BR:
ocm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CBP12_06845 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CBP12_06845 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CBP12_06845 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ART79903
UniProt:
A0A1Y0CX36
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Position
complement(1490059..1491504)
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AA seq
481 aa
AA seq
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MDNTHPLWQTGWYGQGRWQTCAEQYEVINPATQQVLAKVAKCGTKETQTAIDAAEHALKS
WRQTSAKERAKILRRWFELMLEHQEALATLMVLEQGKPLTEAKGEVSYAANFLEWFAEEG
KRAYGETIPSPDTSHRIWVIKQPVGVVAAITPWNFPLAMITRKVGPALAAGCTVVVKAAS
ATPLSANALAVLAEQAGLPAGVFNVVSGDTQAISDTLMDSAVVRKLSFTGSTKVGKLLMA
NAANTVKKLSLELGGNAPFIVFDDADLDAVVKGAMAAKFRNTGQTCVCVNRFLVQENIYD
RFVQQLANAAQQLKVGDGLEKGVEQGPLINEDGLKKVQQHLDDALSKGARVICGGKPHAL
GGTFFEPTVLAEATDNMLLASEETFGPVAACFRFKDEAEAIARANDTPFGLAAYFYTQDL
NRVYRVSEALESGMVGVNAGIISNEVAPFGGVKESGIGREGARDGLAEYLETKYVNLGEV
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggataacactcatcccctttggcaaacgggctggtacggccaaggccgttggcaaact
tgcgctgagcaatatgaggtcattaatcctgctactcagcaagtgctagctaaggtagct
aagtgtgggactaaagaaacgcaaacggcgattgatgccgccgagcatgcgcttaaaagc
tggcgccagacgagtgcgaaagagcgcgctaagatattacggcgttggtttgagctgatg
cttgagcatcaagaagcactggcaacgctcatggtattagagcagggcaagccgctcacc
gaagccaaaggtgaagttagttatgcggccaattttttagaatggtttgccgaagagggt
aagcgcgcctatggcgagaccattcctagtccagatactagccatcggatctgggtcatt
aagcaaccggtaggcgtagtggcggctattacgccttggaacttcccgctggccatgatc
acccgcaaagtgggccccgctttagccgcaggttgtactgtggtagtaaaagccgccagt
gcgacgccccttagtgctaacgcactggcggtactggctgagcaagccggcctccctgcg
ggggtatttaatgtggtgtctggggacacccaagccatcagtgacacgctaatggatagc
gctgtggtgcgtaagctgtcatttaccggctccactaaagtaggcaagttgctgatggca
aatgcggctaacacggtgaaaaaactatctttagagctgggcggtaatgcgccttttatt
gtctttgatgatgcggatctcgatgccgtcgtaaaaggcgcgatggccgctaaatttaga
aacaccggccaaacctgtgtttgtgtgaaccgctttttagtccaagaaaatatctacgac
cgttttgtacagcagctcgctaacgctgcgcaacaacttaaggtaggggatggcttagaa
aagggcgtagagcagggtcccttaattaatgaagatggcttaaaaaaagtgcaacagcac
ctcgatgatgcgctaagtaaaggcgcgcgcgtgatttgtggcggtaaacctcatgctttg
ggtggcaccttttttgagcctaccgtattagccgaagcaacagataatatgctgttggcc
agtgaagagacctttggtccggtggcggcgtgttttcggtttaaagatgaagccgaggcc
attgctcgtgcaaacgacaccccctttggcttagcggcgtatttttatacgcaagatctt
aatcgcgtttatcgagtatccgaagccttagagtcgggcatggtaggcgtcaatgccggc
attatttctaatgaagtggcgccctttggcggggtaaaagagtcaggtataggccgagag
ggggcacgtgatggcttagcagaatacctagaaaccaagtacgttaatttaggggaagtg
aattag
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