Oceanisphaera avium: CBP12_06950
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Entry
CBP12_06950 CDS
T04855
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocm01002
]
CBP12_06950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocm01011
]
CBP12_06950
Peptidases and inhibitors [BR:
ocm01002
]
Cysteine peptidases
Family C82
CBP12_06950
Peptidoglycan biosynthesis and degradation proteins [BR:
ocm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CBP12_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ART81134
UniProt:
A0A1Y0D1B7
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All DBs
Position
complement(1511403..1512500)
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AA seq
365 aa
AA seq
DB search
MPQGSLNAIPEQVQLEVELDALSVPSTVELTEEAWSEPHNELSELDFDIEEPELELPSRS
QLSSPLPAPLMRDPQRYDEDLAAGVKRFQARHGLTVDGVIGAQTYAWLNTPPLQRAQLLM
RSMLRTLIGDDLPSSYMLVNIPEYHLRLYQNQALVFESNVIVGQNKRKTPIMASKITSVV
FNPPWNVPRSIINKDILPKLARDPYYLDRQGFEVLDNSGTHIIPREEWQTRFEEGGGFPY
RLRQRPGRGNALGAYKFHLPNNDAIYLHDTPGRGLFARDSRAFSSGCVRVEGAEQLADWL
LHDQLSSARLSALKANPETKWVKVKQALPLYMVYWPGWLGENGQPQFRNDIYGFDNGITS
PFKAG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaggctcacttaatgcgatacctgagcaagtacagctggaagttgagcttgac
gcgctaagcgtgcctagcacggtagagctaaccgaggaggcatggagtgagccccataat
gagctcagtgaattagactttgatatagaagagccagagctggaattgcccagtcgctct
caactcagctcgcctttaccagctcccctgatgcgcgatcctcagcgctatgatgaagac
ttagctgcaggcgtgaaacgctttcaagcgcgccatggtttaaccgtggatggcgtgata
ggggcgcaaacctatgcttggttaaatacgccgcctttgcaacgcgcccagttattaatg
cgcagtatgctgcgcaccttaattggcgatgacttacccagctcctatatgctggttaat
attccagagtaccatttgcgactttatcaaaatcaagctttagtgtttgagagcaatgtg
attgtcggccaaaacaagcgaaaaacgcccattatggcgagcaagatcaccagcgtcgta
tttaatccaccttggaatgtaccgcgctctattattaataaagatatcttgcctaaattg
gctcgagatccttattacctcgaccgccaaggatttgaagtactcgataactccggcacc
cacattattcctcgtgaagaatggcaaactcgatttgaagaaggcggcggttttccttat
cgactccgccagcgtccagggcggggcaatgcactcggcgcttataaatttcacttaccg
aataacgatgcaatttatctgcacgacaccccagggcggggattatttgcgcgtgatagt
cgcgcctttagctcaggctgcgtacgggtagagggcgcggagcagttagcggattggtta
ttacatgatcaactaagcagtgcacgcttaagcgcgcttaaagctaatcctgagacaaag
tgggtaaaggtaaagcaagcactgccgttatatatggtgtattggcccggttggttagga
gaaaatggccaaccgcagtttagaaatgatatctatggctttgataatggcattaccagt
ccttttaaggcggggtaa
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integrated database retrieval system
