Oceanisphaera avium: CBP12_07195
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Entry
CBP12_07195 CDS
T04855
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ocm
Oceanisphaera avium
Pathway
ocm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBP12_07195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocm03019
]
CBP12_07195
03009 Ribosome biogenesis [BR:
ocm03009
]
CBP12_07195
Messenger RNA biogenesis [BR:
ocm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CBP12_07195
Ribosome biogenesis [BR:
ocm03009
]
Eukaryotic type
Pre-60S particles
RNases
CBP12_07195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF8174
Motif
Other DBs
NCBI-ProteinID:
ART79956
UniProt:
A0A1Y0CYJ3
LinkDB
All DBs
Position
complement(1563770..1564315)
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AA seq
181 aa
AA seq
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MSLHAENLVWIDLEMTGLEPEQHKIIEIASIVTDKELTILAEGPVLAIHQSEDELAKMDE
WNVNTHTQSGLVARVKASKVDEATAVAQTLAFLKQWVPEQTSPLCGNTIGQDRRFLVRYM
PELEAFFHYRSIDVSTVKELVRRWQPAILERFTKQGSHQALDDIRESISEMQFYREQVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagcttacatgcagaaaatttggtttggatcgatttagaaatgactggccttgaaccg
gagcaacataaaattatcgaaatcgccagtatcgttaccgataaagagttaactattttg
gctgaagggccggtgttagcgattcatcaaagtgaagatgagttagcgaaaatggatgag
tggaatgtcaatactcatacccagtctggcttggtggcgcgcgttaaagctagcaaagtg
gatgaagccacagccgtggcccaaaccttagcctttttaaaacaatgggtgcccgagcaa
acttcgcctttatgtggcaatactattggacaagatagacgatttttagtgcgctatatg
ccagagttagaagcgttttttcattatcgcagcattgatgtgagtaccgtgaaagagttg
gttcgccgctggcaacctgccatattggagcgctttacaaaacaaggcagccatcaagcc
ttagacgatattcgcgagtcgatcagtgagatgcaattttatcgagagcaagtttttaaa
atatag
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