Oceanisphaera avium: CBP12_07260
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Entry
CBP12_07260 CDS
T04855
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBP12_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocm03019
]
CBP12_07260
03110 Chaperones and folding catalysts [BR:
ocm03110
]
CBP12_07260
03029 Mitochondrial biogenesis [BR:
ocm03029
]
CBP12_07260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocm04147
]
CBP12_07260
Enzymes [BR:
ocm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CBP12_07260
Messenger RNA biogenesis [BR:
ocm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CBP12_07260
Chaperones and folding catalysts [BR:
ocm03110
]
Heat shock proteins
HSP60 / Chaperonin
CBP12_07260
Mitochondrial biogenesis [BR:
ocm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CBP12_07260
Exosome [BR:
ocm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CBP12_07260
Exosomal proteins of other body fluids (saliva and urine)
CBP12_07260
Exosomal proteins of breast cancer cells
CBP12_07260
Exosomal proteins of colorectal cancer cells
CBP12_07260
Exosomal proteins of bladder cancer cells
CBP12_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
ART79969
UniProt:
A0A1Y0CXE5
LinkDB
All DBs
Position
complement(1578606..1580252)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARIKMLAGVNILADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVRQAVEELKALSVPCKDTKAIAQVGTISANADETVGALIAEAMEKVGTDGVITVEEG
QGLQDELDVVEGMQFDRGYLSPYFINKQETGTVELDDAFILLVDKKVSNIRELLPTLEGV
AKQSKPLLLIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLELEKATLEDLGRAKRVVISKDNTTIIDGVGEVAAIEARVAQIRQQIEDSSSDY
DKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKTRVDDALHATRAAVEEGVVPGGGVALV
RAASQLQELLGDNEDQNVGIKVALRAMESPLRQIVTNAGEEASVVVSKVKDGSGNFGYNA
SNDSYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKESGGMPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtaatgacgcccgcatcaaaatgctggcgggtgta
aatattttggccgatgcagtaaaagtaacgctgggtcctaaagggcgcaacgtggtactg
gacaagtcatttggtgctcctgcgatcaccaaagatggcgtgtcggtggcaaaagagatc
gagctggaagataagtttgagaacatgggcgcgcaaatggttaaagaagtggcgtctaag
gcaaacgatgaagccggtgacggtactactactgcaaccgtattagcgcagtctattgtg
aatgaaggcttaaaggccgtggctgcgggcatgaatcccatggatcttaagcgcggtatc
gataaagccgtgcgccaagccgtagaagaattaaaagcgctgtctgtaccttgtaaagac
accaaagccattgcgcaggtaggcactatctctgccaacgccgatgaaactgtgggcgcc
ttaattgctgaagccatggaaaaagtgggcacagatggggtgatcaccgtagaagaaggt
caaggcctacaagatgagctggatgtagtggaaggcatgcagtttgatcgtggctacctg
tctccttatttcatcaacaaacaagaaaccggtaccgttgaattagacgatgcctttatt
ttgttggtagataagaaagtctctaatattcgcgaattgttacccacccttgaaggtgtg
gctaagcagtctaagccactattgctgattgctgaagacgtagaaggcgaagcactggca
accctagtggttaacaacatgcgcggcattgtgaaagtagcggctgttaaagccccaggt
tttggtgatcgccgtaaagccatgttgcaagacattgctattttaaccggtggtaccgtc
atttctgaagaagtgggtctggagctggaaaaagccaccctagaagacttaggccgtgct
aagcgagtggtgatcagtaaagataacaccaccattattgatggcgtgggtgaagtggct
gctattgaagcgcgtgttgcccaaattcgtcagcaaattgaagactcaagctctgattac
gacaaagagaagttacaagagcgggtggctaagttagccggtggtgtcgcggtaattaag
gtgggcgccgccactgaaatggaaatgaaagagaagaaaactcgcgttgatgatgcgtta
catgccactcgcgccgccgttgaagaaggggtagtacccggtggtggtgtagctctggta
cgtgccgcttctcagctacaagagttgctaggtgataacgaagaccaaaacgttggtatt
aaagtggcactgcgcgccatggagtctccactgcgccaaattgttactaacgccggtgaa
gaagcctcggttgtggtatcaaaagtaaaagatggtagcggtaacttcggttataacgcc
agtaacgacagctatggcgatatgctagagatgggtatcttagaccccactaaagtaaca
cgttctgcattacagtttgccgcatcggtggcaggcttgatgatcaccaccgaagccatg
gtcactgacctaccgcaaaaagaaagtggtggcatgccagatatgggtggcatgggcgga
atgggtggcatgggcggcatgatgtaa
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