Oceanisphaera avium: CBP12_07455
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Entry
CBP12_07455 CDS
T04855
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_07455
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CBP12_07455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
Zn_ribbon_LapB
Lon_C
AAA_22
AAA
AAA_16
SLFN-g3_helicase
GvpD_P-loop
RecA
ABC_tran
AAA_24
AAA_14
nSTAND3
Rad51
NTPase_1
AAA_29
DUF7125
Zeta_toxin
NACHT
cobW
DAP3
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ART80000
UniProt:
A0A1Y0CXE8
LinkDB
All DBs
Position
complement(1612626..1613996)
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AA seq
456 aa
AA seq
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MAKTKTAFVCGECGGEFPRWQGQCTECKEWNTITEIRLAPAAASASRNSRFVGYAGAQDN
KVQTLDQVALTELPRIGSGFSELDRVLGGGMVPGSAILIGGNPGAGKSTLLLQVMCGLAS
RMKTLYITGEESLQQVAMRAQRLGLPRDKLRMLSETSVEQICHIAREEKPAVIVIDSIQV
MHVEGVTSSPGSVSQVREAAAQLTRYAKQHGVVVLMVGHVTKDGALAGPKVLEHCIDCSI
MLDGANDSRFRMLRSHKNRFGAVNELGVFAMTETGLKEVSNPSAIFLSRGEEQTTGSVVM
IIWEGTRPLLVELQALVDYSQLGNPRRVTVGLEQNRLSMLLAVLHRHGGLQMADQDVFVN
VVGGVRVEDTSADLALLLALVSSFRDNALPQELVVFGEVGLSGEIRPVPSGQERLMEAAK
HGFTRAIIPWANRPKHSPPGMEVIAVKKLEEALEAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagactaaaacggcgtttgtatgtggtgaatgtgggggtgaatttccacgctgg
caggggcaatgtactgagtgtaaagagtggaataccatcaccgaaattcgcttggcgcct
gctgccgcttccgctagtcgcaatagtcgttttgtgggctatgccggcgctcaagacaat
aaagtacaaacccttgatcaagtcgcgcttaccgaattgccgcgcattggcagtggcttt
agcgagcttgaccgagtactaggcggcggtatggtgccaggctctgccatattaattggc
ggtaacccaggcgcgggtaagagtactttattgctacaagtgatgtgtggcttagccagt
cgtatgaaaaccttatatatcactggcgaggagtcgctacagcaagtggcgatgcgcgct
cagcgcttaggtctgccccgagataagcttcgcatgttatctgaaaccagcgttgagcaa
atttgtcacattgcccgtgaagaaaaaccggcagtgatcgtaattgactccattcaagtt
atgcatgtggagggcgtgacgtcatcaccaggctcggtcagtcaagtgcgcgaagccgcg
gcccagctcactcgttatgctaagcaacatggcgtggtggtattaatggtagggcacgtc
actaaagacggggcgttggcaggacctaaggtgttagagcactgtatagattgctctatt
atgctagatggcgctaacgatagtcgttttagaatgctgcgtagtcataaaaaccgcttt
ggtgccgtaaatgagttaggcgtatttgccatgactgaaacaggcttaaaagaggtgagc
aacccctcggctatctttttaagtcgcggtgaagaacaaaccactggctcagtcgtcatg
attatttgggaaggcacgcggcccttattagtagagctacaagcactggtggattattca
caacttggtaatccgcgccgggtgacggtggggcttgagcaaaatcgcctctcgatgtta
ttagcagtgttacaccgccacggtggtttgcaaatggccgaccaagatgtgtttgtaaac
gtagtgggtggcgtacgagtggaagacaccagtgccgatttagctttactactggcgcta
gtttcgagctttcgtgataacgccttaccgcaagagttggtggtgtttggtgaggtgggg
ttatcgggtgaaatacgccccgtgccctcagggcaagagcgcctgatggaagcggccaag
catggctttactcgcgctattattccttgggcaaatcggcctaaacactcaccgccaggc
atggaagtgattgccgttaaaaaattagaagaggcgctagaagcgctgtaa
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