Oceanisphaera avium: CBP12_08160
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Entry
CBP12_08160 CDS
T04855
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocm03036
]
CBP12_08160
Chromosome and associated proteins [BR:
ocm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CBP12_08160
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
ART80122
UniProt:
A0A1Y0CXS6
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All DBs
Position
complement(1769470..1770357)
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AA seq
295 aa
AA seq
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MSYPLIEQFVDALWLEKGLADNTLASYRSDLSHFARWLDGEGDSLVAVDGATLQQYLAYR
LDTGFKASSTARMLSVLRRFFQYLHREQLRLDDPSILIAGPKLPSRLPKDLSEQQVLNLL
EAPEVDDPLELRDKAMLELLYATGLRVSELVGLSMESISLRQGLVRVTGKGNKERLVPMG
EEALHWLSLYLKAARAFLLGEQPSDVVFPSRRARQMTRQTFWHRIKIYAQRAGINSDLSP
HTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATHRLNALHAEHHPRG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccattaattgaacaatttgttgatgccctgtggttagaaaaggggcttgcc
gataataccctagcttcctatcgcagtgacttaagtcactttgctcgctggctagacggc
gaaggtgatagcctagtggcagtagatggcgcaaccttgcagcaatatttagcttatcga
ctcgatacaggttttaaagccagtagcacggcgcgcatgctgagcgtactgcgccgcttt
tttcagtatttgcaccgtgagcaattacgactcgacgatcccagtatcttaattgctggc
cctaagctgccaagccgactgcccaaagacttgagtgaacaacaagtgcttaatctattg
gaggcgcctgaagtagatgatccgctagagctgcgtgataaagccatgttggagttattg
tatgccacgggattgcgagtcagtgagttagtgggattatccatggaaagcattagcctg
cgccaaggcttggtgcgcgtgaccggtaaaggtaataaagagcgactagtgcccatgggc
gaagaagcgttgcattggctttcgctatatttaaaagcggcgcgcgcttttttattaggc
gagcagccctcagatgtagtgtttccctcgcgccgggctcggcaaatgactcgccaaact
ttttggcaccgaattaaaatttatgcccagcgcgccggcattaatagtgatttatcaccg
cacaccttgcgccacgcctttgccacccatttgctcaatcacggtgccgatctgcgggta
gtgcaaatgctgctaggtcactcagacttatccaccactcaaatttatacccacgtcgcc
acccacagactcaacgccctccatgcagagcaccaccctagaggttaa
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