Oceanisphaera avium: CBP12_08735
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Entry
CBP12_08735 CDS
T04855
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
ocm
Oceanisphaera avium
Pathway
ocm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBP12_08735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocm02000
]
CBP12_08735
Transporters [BR:
ocm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CBP12_08735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
TniB
SMC_N
AAA_16
AAA
RsgA_GTPase
AAA_14
AAA_5
RNA_helicase
AAA_29
ATP-synt_ab
Mg_chelatase
NACHT
AAA_33
G_glu_transpept
MMR_HSR1
nSTAND3
NB-ARC
Septin
PRK
Motif
Other DBs
NCBI-ProteinID:
ART80224
UniProt:
A0A1Y0CYY3
LinkDB
All DBs
Position
complement(1893953..1895065)
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AA seq
370 aa
AA seq
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MVSSLAGMRVMSEHNASLASAEPPLLTLENLSQYFTLGGGLWRRGHTLYAVDGISFTLAP
GKTLGLVGESGCGKSTLARTLLKLQTPSSGRIYFDGQDITDYSARQMRPLRQQMQMVFQD
PQESLNSRHTIATLLQEPFIIHGVGSAKERQVWIKELLQRVGLPISALSRYPHEFSGGQR
QRIGIARAMALKPKLLVCDEAVSALDVSVQSQVLNLLLSLQQEYQLAMVFIAHNLAVVKH
ISDDIAVMYLGRIVELAPADKLYSQALHPYTQALLAAIPEPDPRKRKAPLTLQGEPPSPA
NPPSGCHFRTRCPYAAVRCANEIPILKPASTQVSTNQAQSEVHQVACHYYQEILQGERLP
NNVSSCDIIS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcatcactggcaggaatgcgcgtcatgagtgagcacaatgcatccttagccagt
gctgagccaccgctattaacactcgagaatctaagccagtattttactcttggcggcggg
ctgtggcgacggggtcataccttatatgctgtagatggcataagttttactttagcgcca
ggtaaaacactcggcctagtaggagagtcagggtgtggtaagtcaacactggcgcgaact
ttacttaaactccaaacgcctagcagcgggcgcatttattttgatggccaagatattacc
gactattcagcgcgccaaatgcgtcccttacgccagcagatgcaaatggtgtttcaagac
cctcaagagtcgctaaatagccgtcataccattgccaccctcttacaagagccttttatt
atccacggagtgggcagcgctaaagaacgccaagtgtggattaaagaattactgcaacga
gtgggcttgccgatttctgctctcagtcgctaccctcatgagttttcgggggggcaacgc
cagcgtattggtattgcgcgcgctatggcacttaagccaaagttactggtgtgcgatgaa
gccgtatccgcattagatgtatcggtacaatcgcaagtgttgaacttattactttcgcta
caacaagaatatcaattagcgatggtgtttattgcacataatcttgcggtggttaaacac
atttctgatgatatcgcggttatgtacttgggacgtattgtggagcttgcacctgctgat
aaattatatagccaagcgttacatccttatacacaagccttgttagcggctattcccgag
cctgatccgcgaaaacgaaaagcgcctttaacattgcaaggggagcctccgtctcctgct
aatccaccttcaggctgtcattttcgcactcgctgcccctacgcagctgtacgttgtgcc
aacgaaattcccatattaaagccagcttcaacccaagtgagcacaaaccaagcacagagt
gaagtacatcaggtagcgtgtcattattaccaagagattttgcagggtgaacgtttgcct
aataacgtcagcagctgtgatattatttcttaa
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