Oceanisphaera avium: CBP12_08850
Help
Entry
CBP12_08850 CDS
T04855
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00550
Peptidoglycan biosynthesis
ocm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBP12_08850
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocm01003
]
CBP12_08850
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ocm01011
]
CBP12_08850
Enzymes [BR:
ocm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CBP12_08850
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CBP12_08850
Glycosyltransferases [BR:
ocm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CBP12_08850
Peptidoglycan biosynthesis and degradation proteins [BR:
ocm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CBP12_08850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ART80243
UniProt:
A0A1Y0CY41
LinkDB
All DBs
Position
complement(1918179..1920521)
Genome browser
AA seq
780 aa
AA seq
DB search
MAKQTRTKKSTKKKPLEQRRFGWGLLLKVALVMAVLMGVFGIYLDSQVRERFEGQKWALP
ALVYSRPLELFPGQKLSHAQMLRELQMLNYRKVDSPSGPGEYFANNSRIDIHRRSFNFSD
GPEDARQISLTFAGQRLQAIKNPVNGRELGYARMDPVLLDRLNVDKREDRLLVRLDQVPE
LLKTALITVEDRDFYKHDGVSPMAIIRALVVNLKAGRTIQGGSTLTQQLAKNLFLTPDRS
LWRKVQEAYMALIIDFRYDKDEILEAYLNEVYLGQNGNQGVYGFGLASYFYFGLPLNELN
PDQIALMVALVKGPSYYDPWRNSERARDRRDLVLRLLANDGHIDRATYEQASGAPLRLIE
RGRMGYGRTPAFMGLLRQELQERFGNEFLNQNGLKIFSSLDPIAQHSAEQAIAEQVKQLR
ANTKKSDLEAAMVVSNWRKGEVSAVVGGADPSYAGFNRALSARRAIGSLIKPPVYAQALA
SGFTLGSAIKDQPISLRSEGGQVWKPNNYDRKFRGQVMFVDALAKSLNVPTVNIGMAVGL
DKIIKGLERMGVRQSIPAYPSLMLGTLELTPFEVNQLYLTLANQGLYQPLTSIRAIQDNQ
GELVYQHTAKATQVLDPDAGYLALYAMTKVVGGGTAAHLAARFPNRVMAGKTGTTNDLRD
AWYAGLDNEELASVWVGLDNNGTTGLTGASGALRVYSRYLDSRGVDSLELTQPQGVEQVN
FAYSDGQPADPRCEQTRLLPAKSADLPPIRGCRPATPTYDIPAAGEQIGDWLKDIFNFAR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagactcgaactaagaaaagcaccaagaaaaaaccgcttgaacagcgccgc
tttggctggggcttgttgcttaaggtcgcactggtgatggcggtactgatgggggttttt
ggtatctatttagatagccaagtgcgtgagcgttttgaaggccaaaagtgggcattgcca
gcattagtatatagccgacccttagaattattccctggacaaaagctctctcacgctcaa
atgctgcgtgagctgcaaatgcttaattatcgtaaagtagacagtcctagtggacctggg
gaatattttgcgaataacagtcgcattgatattcaccgtcgttcttttaacttttctgat
gggccagaagatgcgcgccaaatttcacttacctttgccggacaacgcctacaagcgatt
aaaaatccggtcaatggtcgtgagttgggctatgcgcgaatggacccggtgctgttagac
cgactgaatgttgataagcgagaagaccgcttactggtgcgcttagaccaagtgcctgag
ttattaaaaactgcgctaatcaccgtagaagaccgagatttttataaacatgatggcgtg
tcgcccatggcgataatacgggctttggtggttaacttaaaggcgggtcgcactatacaa
gggggcagtacgctgacccagcaacttgctaaaaacttatttttaacgcccgatcgcagc
ttatggcgcaaggtacaagaagcctacatggcgctaattattgattttcgctatgacaaa
gatgaaatcttagaagcttacttaaatgaggtttacttaggccaaaatggtaaccaaggc
gtttatggatttggtttagccagttatttttattttggcttaccgcttaatgagttaaat
cccgatcaaatcgcgttaatggtggctttggtaaaaggtccctcttattacgatccttgg
cgcaacagtgagcgtgcgagagatcgccgtgacttggtgctgcgcctgctggcaaatgat
ggccatattgatcgcgccacttatgagcaggccagtggggcgccactgcgcctcattgag
cgtggacgcatgggctatggccgtacgccggcatttatgggcttgttgcgccaagagttg
caagagcgatttggtaatgaatttttaaatcaaaatggcttgaagatttttagtagtctt
gaccctattgctcagcacagcgccgagcaagctatcgccgagcaagtaaaacagctgcgt
gcgaatactaaaaaatcggatttagaagcggccatggtggtcagtaattggcgaaaagga
gaggtgagtgccgtcgtgggcggtgccgaccccagctatgctggctttaaccgagcattg
tcggcacgccgtgccattggctccttaattaagccgcctgtctatgctcaagcattggca
tccggctttactttaggcagtgccattaaagaccaaccgataagcttgcgcagtgaaggc
ggacaagtatggaagcctaataactatgatcgtaaattccgcggacaggtgatgtttgtg
gatgcgcttgctaaatctcttaacgtaccgaccgtcaacatagggatggcggtgggttta
gataaaatcattaaaggcttagagcgcatgggagtgcgccaatctattccggcttatccg
tcgttaatgttaggcaccctggagttaacgccgtttgaagtaaaccagctgtacttaact
ttggctaaccaaggcttatatcagcctcttacttctattcgagcaattcaagataatcaa
ggtgaactggtttaccaacacacggccaaagctacccaagtcttagatcccgatgcgggt
tacttagcgctatatgccatgacaaaagtggtcggtggcggtaccgcagcccatttggcg
gcgcgctttcctaaccgagtaatggccggtaaaacgggtaccactaacgatctgcgggat
gcttggtatgccggcttagataatgaagagctcgccagtgtgtgggtagggttagataat
aatggcactaccggattaacgggtgccagtggcgcgctgcgggtgtatagccgttattta
gatagccgaggtgtcgactcacttgagctaactcaaccgcaaggggttgagcaggtgaat
tttgcatatagcgatggccagcctgccgacccaagatgcgagcaaacgcggttattaccg
gcaaagtctgccgacttaccgcccatacggggttgtcgaccggctacgcccacttacgat
attccggctgcgggtgagcaaattggtgattggctaaaagatatctttaacttcgcaaga
taa
DBGET
integrated database retrieval system
