Oceanisphaera avium: CBP12_10050
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Entry
CBP12_10050 CDS
T04855
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00300
Lysine biosynthesis
ocm00470
D-Amino acid metabolism
ocm01100
Metabolic pathways
ocm01110
Biosynthesis of secondary metabolites
ocm01120
Microbial metabolism in diverse environments
ocm01230
Biosynthesis of amino acids
Module
ocm_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CBP12_10050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBP12_10050
Enzymes [BR:
ocm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CBP12_10050
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
CutC
Motif
Other DBs
NCBI-ProteinID:
ART80443
UniProt:
A0A1Y0CYN3
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Position
complement(2188562..2189818)
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AA seq
418 aa
AA seq
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MDYFNYQTDGRLYGEGCDLSVLAEQYGTPLYVYSRATLERHWHAFDQAAGDVAHLICYAV
KANSNLAVLGVLARLGSGFDIVSKGELCRVLAAGGDASKVVFSGVGKRVEEIEFALEKNI
FCFNVESVAELVRINEVAGRLGKIAPISIRVNPDIDAGTHPYISTGLKENKFGIPIEQAQ
DIYAQAAAMENLAIHGLDCHIGSQLTEVAPFLEAVDKLLVLIDALASDGIHIKHLDVGGG
LGVRYDNETPPEPKEYVQQIKAKLQGRNLTLVFEPGRAIAANAGVLLTRVEHIKPGDAKS
FAIVDAAMNDLIRPALYSAWQAIIPVDNTLERAKAVYDVVGPICETGDFIGKDRELAITE
GDLLAVRSAGAYGFVMASNYNSRPRSAEVMVDKEQAILVREREVLSDLWRGEHLLPQA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttggattattttaattatcaaaccgatggccgcctctatggtgaaggctgtgatttaagc
gttttagccgagcaatatggcacgccactctatgtttattcacgagcaacgttagagcgg
cactggcacgcctttgatcaagccgcgggggatgtggcgcacttaatctgttatgccgta
aaggctaactctaaccttgcggtgctaggtgtgttggcgcgcttaggctctggctttgat
attgtgtctaaaggtgagctgtgtcgagtactggccgccggtggcgatgccagcaaagtg
gtgttttctggcgtgggcaagcgagtcgaggaaattgaatttgcgcttgagaagaatatt
ttctgttttaacgtcgagtctgtggctgaattggtgcggattaacgaagttgccggccgt
ttgggtaaaatagcccctatttctattcgagttaatcccgacattgatgctggcacccat
ccttatatttccaccggtcttaaagaaaataagtttggtattcctattgagcaggcccaa
gacatttatgctcaagccgccgccatggaaaacttagctattcacggacttgactgccat
attggctctcagctcaccgaagtggcgccatttttagaagcagtggataagctattagta
ttaattgatgccctcgccagtgatggtattcatattaagcacttagatgtgggtggcggc
ttaggcgtgcgctacgataatgaaacgccgcctgagcccaaagaatatgtgcaacaaatt
aaggctaaattacaagggcgcaatctcaccttggtgtttgaaccgggccgtgccattgct
gctaatgctggcgtattgctcacccgtgtggagcacataaagcctggcgatgctaaaagc
tttgctatcgttgatgccgctatgaacgatctcatccgcccagccttatacagtgcgtgg
caggccattatccccgtggataacaccttagagcgagccaaggcggtctatgacgtggta
gggcctatttgtgaaacgggcgattttattggtaaagaccgtgagctagcgatcaccgaa
ggcgacttattagcggtacgctctgcgggtgcttatggttttgtcatggcatctaattac
aacagccgcccaagaagcgcagaagtgatggttgataaagagcaggctattttagtacgc
gagcgcgaagtattaagcgacttgtggcgcggcgagcatctgttgccgcaggcgtaa
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