Oceanisphaera avium: CBP12_10490
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Entry
CBP12_10490 CDS
T04855
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocm03032
]
CBP12_10490
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_10490
Enzymes [BR:
ocm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBP12_10490
DNA replication proteins [BR:
ocm03032
]
Prokaryotic type
DNA Topoisomerases
CBP12_10490
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBP12_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ART80516
UniProt:
A0A1Y0D079
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All DBs
Position
2289442..2291859
Genome browser
AA seq
805 aa
AA seq
DB search
MSEHTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDESLAGHCKDI
VVIIHADGSVSVSDDGRGIPVGIHEEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEKLQLTIWRDGKVHEQTYRHGVPQAPLTVKGDTEKSGTLIRFWPSHDTFTNT
QYHFEILAKRLRELSFLNSGISIKLTDEQTDKEAHFEYEGGISAFVEYLNQNKTPIHPKA
FHFVSEEEGGITVEVAMQWNDSYQESIFCFTNNIPQRDGGTHLAGFRGALTRTLNSFMDK
EGYSKKAKTSASGDDAREGLTAVISVKVPDPKFSSQTKDKLVSSEVRTAVEQAMNERLSE
YLLENPQDAKIVVTKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHYIIIMTDADVDGAHIRTLLLTFFYRQMPEIVERGYIYIAQPPLYKVKK
GKNEQYLKDEDAMLEYQTNLALEGASLHVNESAPAINGEHLEKLVKNFRKVEILIERLAR
RAPEVVLNELIYQPELTLEALTDEAQVAEWVKNINESLVVDNTHGAEYILEYEFSEERNC
YLPKVKVRQHGIDREFPISYDFFASGEYRSIAELGNGIANLMEEGGYVKRGEKTKQVDSF
AEGLEWLMQESKRGLYVQRYKGLGEMNPDQLWETTMDPDSRRMLQVKIEDAIAADQLFST
LMGDHVEPRREFIEANALRVANLDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacacacttacgactcttcgagtattaaggtattaaaaggtctggatgccgtg
cgtaaacgtccgggaatgtacatcggcgataccgatgatggcacaggtctgcaccacatg
gtgtttgaggtggtggataactcgatagatgagtccttagccggacactgtaaagacatt
gtggttatcattcatgcggacggctcggtatcggtttctgatgatggccgcggtattcca
gtcggtatccatgaagaagaaggccgctccgccgctgaagtcattatgacggtattgcat
gccgggggtaagtttgacgataactcttataaagtatcgggcggcttgcacggcgttggt
gtgtcagtggtaaacgctttatctgaaaagttgcaactgactatttggcgagacggcaaa
gtacatgagcaaacttatcgccatggtgtaccgcaggcgccattaacggtaaaaggcgat
acggaaaaatccggtactcttattcgcttttggccaagccatgacacctttaccaatact
caatatcactttgagatattggcaaagcgcttgcgtgagctgtcgtttcttaactcgggt
atttccattaagttaaccgatgagcaaaccgataaagaagctcactttgaatatgaaggc
ggcattagcgcctttgtggaatacctaaaccaaaataaaacgccgattcatcccaaagcg
tttcactttgtgagtgaagaagaaggcggtattaccgtcgaagtggcgatgcaatggaat
gactcttaccaagagagcattttttgctttactaacaatatccctcagcgcgacggcggc
actcacttagccggctttagaggtgcgctaactcgtaccctaaatagctttatggacaaa
gaaggctatagcaaaaaagctaaaacctcggcctctggcgatgatgcgcgtgaggggtta
actgcggtaatttcagtaaaagtccccgatcctaagttctcatcgcaaaccaaagataag
ttggtgtcatcagaggtgagaacggcagttgaacaagccatgaatgagcgcttaagtgaa
tatcttttggaaaatcctcaagacgccaaaattgtggttactaaaattattgatgccgcc
cgtgctcgagaagcggcgcgtaaagcccgagatatgactcgccgtaagggcgcgctagac
ttagcgggtttaccgggtaagttggcagattgccaagaaaaagacccggcattgtctgaa
ctctacatagtggagggtgactctgcgggcggctctgctaagcagggacgtaaccgtaag
aatcaggcaattttgccgttgaagggtaagatccttaacgttgaaaaagctcgcttcgat
aagatgctctcttctcaagaagtggcgaccttaatcacggcgcttggttgtggtattggc
cgcgatgaatataacccggacaaactgcgttatcactacattattatcatgaccgatgcc
gacgtagatggtgcgcatattcgtaccctcttactcacctttttctatcgtcagatgcca
gaaattgtggagcgtggttatatctatattgcgcagccgcctttgtataaagtgaaaaaa
ggcaaaaacgagcagtatttaaaagatgaagacgccatgctggaatatcaaactaatctg
gcattagaaggtgctagcttgcatgttaatgagtcggcaccggccattaatggtgagcat
ctggagaagctagttaaaaactttcgcaaggttgagattttaattgaacgactggcacgc
cgtgcacccgaagttgtacttaacgagttaatttatcagccagagctgaccttagaagcg
ctgaccgatgaagcgcaagtggcagagtgggtgaaaaacattaacgagtcgttagttgtt
gataatactcatggtgctgaatatattttggaatatgagttttctgaagagcgtaactgc
tacttacctaaggtaaaagttcgccagcacggtattgatcgcgaattcccaattagctac
gacttctttgcttctggtgagtatcgcagcatagccgagttaggtaatggcattgccaac
ctaatggaagagggaggctatgtgaagcgcggtgaaaagaccaagcaagtagatagcttc
gccgaaggtcttgaatggctgatgcaagaaagcaagcgcggtctttatgtacagcgctat
aaaggcttgggcgagatgaacccagatcagttgtgggagaccaccatggatcctgactcg
cgccgcatgctgcaagttaaaattgaagatgccatcgccgccgatcaactattctccacg
ttaatgggtgatcatgttgagccgcgtcgtgagtttattgaagcgaacgccttgcgcgta
gctaacttagatatttaa
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