Oceanisphaera avium: CBP12_11045
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Entry
CBP12_11045 CDS
T04855
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocm03009
]
CBP12_11045
Enzymes [BR:
ocm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CBP12_11045
Ribosome biogenesis [BR:
ocm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CBP12_11045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ART80611
UniProt:
A0A1Y0CZ57
LinkDB
All DBs
Position
complement(2408704..2409405)
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AA seq
233 aa
AA seq
DB search
MRLDKYICYSSDLTLSQARTHIANQQVQVAGHLCTNPAQQVHEHNNISLAGQRLTPRPAR
YIMLHKRLNTLCSHQDGAYPSLFSDLDLEKAELLHLVGRLDADTTGLVLLTDDGRWSYQL
THPQSGCRKVYRVTLRSELATDTAQLFKQGILLQGEAKPTLPAILTPVTAKEVLLTITEG
RFHQVKRMFAAVNNKVLALHREQVGNLQLDLAPREWRYLTSAEVMATHIPKKT
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgataaatatatttgctacagcagcgatttaaccttaagccaagcccgcact
catattgctaatcaacaagtgcaagtcgctggccacctttgtactaaccccgctcagcaa
gtgcatgaacataataatatttcactagctggccaacggctcactcctagacccgctcgt
tatattatgctgcataaacgactcaacaccttatgctctcaccaagatggcgcctatccc
tctttatttagtgatcttgatttagaaaaagcggagctgcttcatttggtaggccgctta
gatgccgataccacaggcttggtactactcaccgacgatggtcgctggtcttatcagctg
actcatccacaaagtggctgtcgcaaagtgtatagggtaacgctgcgatctgaactggcc
accgataccgcgcaattattcaagcaaggtatcttattacaaggcgaagctaaacccacc
ctgcccgcaatcctaacacccgttacggctaaagaagtcttgctcaccataactgaaggg
cgctttcatcaagtaaagcggatgttcgccgccgtgaataataaggtgctggccttacac
agagagcaagtcggcaatttacagttagatctagcgccgagagagtggcgttacttaacg
tccgcagaagttatggcgacccacataccgaagaaaacctaa
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