Oceanisphaera avium: CBP12_11645
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Entry
CBP12_11645 CDS
T04855
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_11645
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBP12_11645
Archaeal homologous recombinant proteins
CBP12_11645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
cobW
ABC_tran
AAA_21
TsaE
nSTAND3
NTPase_1
AAA_22
GTP_EFTU
AAA
Motif
Other DBs
NCBI-ProteinID:
ART80722
UniProt:
A0A1Y0CZG7
LinkDB
All DBs
Position
2525819..2529241
Genome browser
AA seq
1140 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTKAPFTDSGLFAITGPTGAGKTTLLDAICLALYHETPR
MKSVSASSNELMTRHTAECLAEVEFEVKAQGYRAFWSQRRSRNQVDGKLQAPKVELAKLD
GTIITTKINDKLRLTESISGLDFGRFTKSMLLAQGGFAAFLHANANERAELLEELTGTDI
YAHISRLVFENTREQQGTLKELTAHAQGMELLDDAARQQLHTELAAAEADLIHRQKNITE
QQARLEHIKTYQVAKTQQAQSAQALQVAHSAWLAKEAQRQQLKLAAPAQRLQPYWQQWQD
ANTRQQSVLHQLSQVKAELAQATHQQQRLTWQALEVSKQRVQQLSGAEQQLNHEQAKLDQ
QMASNPVAERLGELLGTWRVQVPELSKQQAQLKHGQAAQLSLQTQLNELKTQQERNQHLV
ATSQQQLVIKQADTEQQQHKLTQLLAGQSLGELRQQLQILSQQQGKWSQVHQLWAQMAKQ
QALHQQLTQSIAKQQPELDALEQQLNDSRLAYKVLQEQIRDKEKLLEQEQRIRALEEHRA
RLQPDEACPLCGSEQHPAIEAYQALDDATAASLAAKQLERAERELQGQQLSHTVTKHQAE
LAQRQHQVQVLAEELIELQEQLTSLLAQLQINDVDLNSQQVVLEQRQQELHTLSQQLNDV
EQQQERVQVAQTATRHVEQALSQLENNQRLLSQEQQSLTQQHAQQQALLTEQQDYIIEQE
AALATALAKLGWAVPQHWPTWLADCEQQWQAWKEQQLRHQQLSADSQQVAIQLQLAGTEH
RQWQERWATLNIDDFPARTDVTNPSAELNKLAEQWQQEQQQVQQKTARLDTLYQQESELS
ADLQSRLTKWQQQLAASPFSDEAGFLAALFSEEELAQLVENQRQLEQALQRAQTLAEQAE
QSVAAAKLILGEVDPTHYAALQAQLQQAQAQYDVQQQQVGGWRTQLDTDAKRRARQQSLF
ANIEAEQQTLQLWEQLNHLIGSADGAKYRRFAQGLTLEHLVHLANLRLVRLHGRYQLART
EGGELELSVIDTWQADVARDTQTLSGGESFLVSLALALALSDLVSSKTRIDSLFLDEGFG
TLDSETLEVALDALDALNASGKMIGVISHIEALKERVPVQIKLSKSHGLGVSRLAAEFEV
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcagtctgcgactaaaaaatattaactcccttaaaggggagtggaaaata
gacttcactaaagcgccttttaccgactccggcttatttgcgattacagggcccacaggt
gccggtaaaaccaccttactcgatgccatctgcttggcgctgtatcatgaaactccccgc
atgaaatcagtctcggctagcagtaatgaactcatgactcgccatactgctgagtgctta
gctgaagttgaatttgaagttaaagcgcaaggctatcgcgccttttggagtcaacgtcgc
tctcgtaatcaagtggatggcaagttacaagcgcctaaagtggagctggctaaattagat
ggcaccattattaccactaaaattaatgacaagctgcgcttaacagaaagcatcagtggc
ttagattttggtcgttttactaaatcgatgctgctcgcccaaggcggatttgctgccttc
ttgcatgccaatgctaatgagcgtgccgaattattagaagagctgactggcaccgatatt
tatgcacacatttctcggctcgtctttgaaaatacccgcgagcaacaaggcaccctaaaa
gaattaacagctcatgctcaagggatggaattgcttgatgacgccgcccgccagcagctg
cacacagagctggcggcagccgaagctgacttaattcaccgccagaaaaatatcactgag
caacaagctcgccttgagcatattaagacttatcaagtcgccaaaacgcaacaagctcaa
agcgcgcaggcactacaagtggctcatagcgcatggctggccaaagaggcgcagcgccaa
caacttaaacttgccgcgccggctcagcgcttacagccttattggcagcagtggcaagat
gcgaatacgcgccagcagtcggtattgcatcaactaagccaagtaaaagctgaactagcg
caagcgacgcatcagcaacagcggctcacttggcaggcactagaagtcagtaaacagcga
gtacaacaactcagcggcgctgagcagcaacttaatcatgaacaagcaaagctagaccag
caaatggccagcaaccccgtagcagagcgcttaggagagctattaggcacttggcgagta
caagtgcctgagctgagtaagcaacaagcgcagttaaaacatggtcaagcagcacagctt
agcctgcaaacccaacttaatgagttaaagacacagcaagagcgcaaccaacacctagtt
gctaccagtcagcaacagttagtaataaaacaagccgacaccgaacaacagcaacataag
ctcacccagctgttagcggggcagtcactcggtgagcttcgtcaacaactacaaatacta
agtcagcagcagggaaagtggagccaagtgcaccagctttgggcacaaatggctaaacag
caagcgcttcatcaacaactcacccagagcattgctaaacagcagcctgagctggacgca
cttgagcagcagctcaacgactcgcgtttagcctataaagttttacaagaacaaattcgt
gataaagaaaagctgctcgaacaagaacagcgcattcgtgcacttgaagagcacagagca
agattgcagccagatgaagcctgcccgttatgtggcagtgagcagcatccggccatcgag
gcttatcaagcactggacgatgctactgctgcgagcttggcggctaagcagttagagcgc
gccgagcgcgagttacaaggtcagcaattaagtcataccgtgaccaaacaccaagcagaa
ttggcgcaacgtcagcaccaagtgcaagtattggcagaggagctgattgagttgcaggag
cagttaacgagcctgttagcccaattgcagattaatgacgttgatcttaactctcaacaa
gtagtacttgaacagcgtcagcaagagttacatacgctgagccaacagcttaatgatgtg
gagcaacagcaagagcgagtacaagtcgcgcaaacggcgacgcgccatgtggaacaggcg
ctaagccagttagaaaataatcagcgtttgctcagccaagaacagcagtcgttaactcaa
caacacgcccagcagcaagcactactgactgagcaacaagattatataattgaacaagag
gccgccctcgccacagcactggctaagcttggttgggcagttcctcagcattggccaact
tggttggcagactgtgaacaacaatggcaagcttggaaagaacagcagttacgacatcag
caacttagcgccgatagccagcaggtagccatacagttacagctggcgggcaccgagcat
cgccagtggcaagagcgctgggccacgcttaatatcgatgattttccggcgcgcaccgac
gtgactaaccccagcgccgagctcaataaattggcggagcaatggcaacaggagcagcaa
caagtacaacaaaaaacggcgcgccttgatacgctgtaccaacaagagtcagagcttagc
gccgacttgcaaagccgattaaccaagtggcagcagcaattagctgccagcccctttagc
gatgaagccggttttttggctgccttatttagtgaggaggagctcgcgcaattagtagaa
aaccagcgccaattagagcaagccttacaacgcgcccagaccttggccgaacaagcggag
caatcggtagcggcggctaaacttatactgggtgaagtagaccccactcactacgcagcc
ttacaagcgcagttgcaacaggctcaagcgcaatacgacgttcaacaacaacaagtgggg
ggctggcgtacccaattagacacagatgctaagcgccgcgcccgtcaacaatcgctattt
gccaacatcgaagctgagcagcaaacgttacagctatgggagcaattaaatcacctgatt
ggctcggcagatggcgcaaaatatcgtcggttcgcccaagggctaacgcttgagcactta
gtgcatttagctaatctgcgcttagtgcgcttacatggccgctaccaattagcgcgtact
gagggcggagagttggagttatcagtgattgatacttggcaagcggatgtcgcgcgcgat
acccagaccttatcaggcggtgaaagtttcttagtgagcttggcgctggccttagccttg
tcagacttggtgagcagtaaaacgcgcattgactcgttatttttagatgaaggttttggc
acgctagactcggaaacattagaagtggcactcgatgcgctcgatgcgctcaatgccagt
ggtaaaatgattggcgtgatcagccatattgaggcacttaaagagcgggtgccggtgcaa
attaaattaagtaagagccatggcttaggcgtaagccgcttggcggcggagtttgaggtt
taa
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integrated database retrieval system
