Oceanisphaera avium: CBP12_12015 Help Entry CBP12_12015       CDS       T04855                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism ocm  Oceanisphaera avium Pathway ocm03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ocm00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     CBP12_12015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ocm03400]     CBP12_12015 DNA repair and recombination proteins [BR:ocm03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      CBP12_12015   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       CBP12_12015 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_23 BCA_ABC_TP_C AAA_25 nSTAND3 Viral_helicase1 NACHT cobW T2SSE DnaJ_CXXCXGXG Motif Other DBs NCBI-ProteinID:  ART80789 UniProt:  A0A1Y0CZP7 LinkDB All DBs Position complement(2606079..2608919) Genome browser AA seq 946 aa AA seqDB search MKKIEVRGARTHNLKNISLDLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC PTHALPLTAQTISQMVDKVLEQPEGEKLMLLAPVVRDRKGEHVKLLESLAAQGFIRARID GEVCDLSDPPPLELQKKHTIEVVVDRFKVRDDLQLRLSESFETALELSGGIASVVAMEPD SATELVFSANFACPQCGYSIAELEPRIFSFNNPAGACSTCDGLGVQQIVDPDKVISNPEL SLSGGAIRGWDKRSYYYYQLLKSLADHYQFDLEVPYQELSQEVQQAVLYGSGRTSIDFKY MNDRGDVLVRKHPFEGILHNMERRYRETESNSVREELGKYQSNRPCPSCHGARLKEGPRN VFVANHTLPQVADMAIGEAHDFFNNMELSGQKAHIADKIFKEIGARLGFLVNVGLNYLTL SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLTTLVHLRDLGNT VIVVEHDEDAILAADYVMDIGPGAGVHGGYIVAQGTPAEVMANPESLTGAYLSGRKSIAI PQQRTPVGDHWLTLTGASGNNLKNVDLTLPLGLMTCVTGVSGSGKSTLINNTLFPIAHRE LNKATISQPAPYRTIEGMDKLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFAATQEA RSRGYKPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDVYVPCDVCKSKRYNRETLEIKYK GLSIHEVLSMTVEEACEFFAPVPAIHRKLQTLMDVGLSYIRLGQSAITLSGGEAQRVKLA KELSKRDTGQTLYILDEPTTGLHFQDIQLLLSVLHRLRDHGNTVVIIEHNLDVIKTADWI VDMGPEGGSGGGEILVTGTPEDIAQHATSHTARFLRPMLEKAAPRT NT seq 2841 nt NT seq  +upstreamnt  +downstreamnt atgaagaaaattgaagtacgtggcgctcgcactcataacctgaaaaatatcagcttggac ttaccaagagataaactgatagtcatcactggcttatcaggttcaggaaagtcttctctt gccttcgatactttatatgccgaagggcaacggcgctatgtggagtcactctcggcctat gcgcgccagtttctttccttaatggaaaagcccgatgtggatcacatcgagggcttatcg ccagccatctctatcgagcaaaagtcgacttcccataacccacgctctactgtgggtacc atcaccgaaatttacgactatttacgactgttatttgctcgagtaggcgaaccgcgctgc cccacccatgccctgcccttaacagcgcaaaccatcagccagatggtcgacaaggtatta gaacaacctgaaggcgagaagctcatgttgttagcgcccgtagtgcgcgatcgcaaaggg gaacacgttaagttactagaaagcctagcggcacaaggttttattcgcgcccgtattgat ggcgaggtgtgcgatctgtcagatccgccccctttagagctccagaagaagcacactatc gaagtggtagtggatcgatttaaggtgcgcgacgacttacaactacgcctatcagagtcc tttgaaaccgcgcttgaattatctggcggcatcgcctccgtggtagccatggagccagac agcgctaccgagctggtcttttctgccaactttgcctgcccacagtgtggttattctatt gcagagcttgagccacgtattttttcttttaataacccagcaggcgcttgcagtacctgt gatggcttaggcgttcaacaaattgtcgatcccgataaagtgatcagtaaccctgaactt agcttatcgggtggtgccattagaggctgggataagcgcagctattactattaccaatta ttaaaatccttagcagatcattaccagttcgacttagaagtgccctaccaagagctatcg caagaggtccagcaagccgtcctttatggctctgggcgcaccagcatcgactttaaatat atgaatgatcgaggcgatgtattagtgcgtaaacacccctttgagggcatcttgcataat atggagcggcgttatcgcgaaaccgagtctaactcggtacgcgaagagttgggtaaatac caaagcaatcgcccttgtcctagctgccatggtgcgcgcttaaaagaaggcccgcgtaac gtatttgttgccaaccataccttgccgcaagtagcagatatggccattggcgaggctcac gacttttttaataatatggagctgagcggccaaaaagcacacatcgccgataaaattttt aaagagattggcgcgcgcctaggctttttagtcaatgtaggccttaactatcttacacta tcgcgcagtgccgatactttatcgggtggggaagcacagcgtatccgtttggcgagccaa ataggcgccggcttagtaggtgttatgtatgttttggacgaacccagtattggcttacac cagcgcgataatgaacgcttactcaccacccttgtccacctgcgcgacttaggtaatacg gtgattgtggtcgagcatgatgaagatgctattttagctgcagactatgtcatggatatt ggccccggcgccggcgtccatggcggttatatagtggcacaaggcacgcccgccgaagtg atggctaaccctgagtctttaacaggcgcttatttatcgggtagaaaaagcattgccatt ccacagcagcgcacacctgtgggtgaccactggctaaccttaactggcgcttcaggcaat aacttaaaaaatgtcgacttaaccttgcctcttggcttaatgacctgtgtgacgggtgtg tcgggctcaggcaagtccacattaattaacaatactttattccctatcgctcaccgcgag ttgaataaagccaccattagccagcccgcgccctatcgcaccatagagggcatggataag ttagataaagtagtggatatagatcaaagccctatcggtcgtaccccacgctctaatcct gccacttacaccggaatttttactcccattcgcgagttatttgcggccacccaagaagcg cgttctcgaggctataagccggggcgtttttcttttaacgttaaaggtgggcgctgtgaa gcctgccaaggggatgggttaattaaggtagaaatgcactttttgccggacgtgtatgtg ccctgtgatgtctgtaaaagcaaacgctataaccgagaaacattagagatcaaatataaa ggtctgagtattcatgaagtcttgagtatgacggtagaagaagcgtgcgagttttttgca cccgtgcccgctattcaccgtaaactgcaaacattaatggatgtgggcttatcttatatt cgcttaggccaatctgctattacgctctcgggtggggaagcgcaacgcgttaagttagca aaagagttatcaaaacgagataccggccagacgttatatatcttggatgaacctactact ggcctgcactttcaagatattcagctgttactcagcgtcttgcaccgcttacgcgatcat ggcaatacggtagtgattattgagcataatctcgatgtcattaaaaccgcagactggatt gtagatatggggcccgaaggcggcagcggcggcggcgaaattttagtgacgggcacgcca gaagacattgcccagcatgccacttcacacaccgctcgtttcttacggccgatgttagag aaagcagcgccccgtacctag

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