Oceanisphaera avium: CBP12_12025
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Entry
CBP12_12025 CDS
T04855
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ocm
Oceanisphaera avium
Pathway
ocm03030
DNA replication
ocm03430
Mismatch repair
ocm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP12_12025
03430 Mismatch repair
CBP12_12025
03440 Homologous recombination
CBP12_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocm03032
]
CBP12_12025
03400 DNA repair and recombination proteins [BR:
ocm03400
]
CBP12_12025
03029 Mitochondrial biogenesis [BR:
ocm03029
]
CBP12_12025
DNA replication proteins [BR:
ocm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBP12_12025
DNA repair and recombination proteins [BR:
ocm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CBP12_12025
TLS (translesion DNA synthesis) factors
Other SOS response factors
CBP12_12025
Mitochondrial biogenesis [BR:
ocm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CBP12_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
SSB_1
Motif
Other DBs
NCBI-ProteinID:
ART80791
UniProt:
A0A1Y0CZN7
LinkDB
All DBs
Position
2610450..2611052
Genome browser
AA seq
200 aa
AA seq
DB search
MANRGINKVILIGHLGQDPEIRYMPNGNAVANITLATSETWRDKQSGEQKERTEWHRVVF
FGKLAEIVGEYLRKGSQVYIEGRLQTRKWQGQDGQDRYTTEIVVDIGGTMQMLGGRPQGG
GGQGGGQQGGWGGQQQGGQPQGGQGNWGGQPAAQQGQGNWNQQAAPSQGQQHQSQSKPAA
PPAAPTYNEPPMDFDDDIPF
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccaatagaggcatcaataaagttatcctgatcggccatctgggtcaggatcctgaa
atacgttatatgcctaacggcaatgcggtcgccaatattaccttggccaccagtgaaacc
tggcgcgacaagcagtctggcgagcagaaagaaagaaccgagtggcatcgggtagtattt
ttcggcaaattagcagaaattgtcggtgaatatttgcgtaaaggctcacaagtgtacatt
gaaggccgcttacaaacgcgtaaatggcaaggacaagatggccaagacagatacaccaca
gaaatagtggtcgatatcggcggtaccatgcaaatgctaggtggtcgcccgcaaggcggc
ggtggccaaggtgggggtcaacaaggtggctggggcggtcaacaacaaggtggccaacca
caaggcggtcaaggtaattggggtggacagccagcggcccaacaaggtcaaggtaactgg
aatcagcaagcggcgccatcacaaggccagcaacaccaatcgcaaagcaaaccagccgct
cctcccgcagctcctacttacaatgagccaccgatggacttcgatgatgatattccattc
taa
DBGET
integrated database retrieval system
