Oceanisphaera avium: CBP12_12400
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Entry
CBP12_12400 CDS
T04855
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBP12_12400
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocm01007
]
CBP12_12400
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocm03016
]
CBP12_12400
Enzymes [BR:
ocm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CBP12_12400
Amino acid related enzymes [BR:
ocm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CBP12_12400
Transfer RNA biogenesis [BR:
ocm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBP12_12400
Prokaryotic type
CBP12_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1f
ABC_tran_CTD
PUMA_CC
DivIC
Motif
Other DBs
NCBI-ProteinID:
ART80858
UniProt:
A0A1Y0CZW9
LinkDB
All DBs
Position
complement(2684584..2687448)
Genome browser
AA seq
954 aa
AA seq
DB search
MEKTFNPTAIEQAMYQQWENKGYFKPHGDTSKPAYSIMIPPPNVTGSLHMGHAFQDTIMD
TLIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEDKTRHDYGREAFIDKIWDWKKE
SGGTITQQLRRLGTSVDWERERFTMDEGLSNAVKEVFVQLYQEDLIYRGKRLVNWDPKLN
TAISDLEVENRDVNGHMWHFRYPLADGVTTSEGKNYLVVATTRPETMLGDTAVAVNPNDP
RYQSLIGKFIDLPLVARRIPIVGDEHADMEKGTGCVKITPAHDFNDAEVGKRHQLPLINI
LTLDAHVREQAEVFTTKGEVSDIYSDALPAEFQGLERYAARKAIVAALDKLGLLDSVKDH
DLVVPYGDRGGVPIEPMLTDQWYVRAAPLAEVATKAVEDGEIEFVPKQYENMYFSWMRDV
QDWCISRQLWWGHRIPAWYDSEGKVYVGRDEAEVRANYQLASDVVLNQDEDVLDTWFSSA
LWTFSTQGWPEKTPDLATFHPSSVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKT
VYVTGLIRDENGDKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPQLAAKIEKDTRS
TFAEGIEAHGTDALRFTLAAMASTGRDINWDMRRLDGYRSFCNKLWNASRYVLMSTEEQD
CGTHSEGKSGELSYSLADRWIQAQLQVTITEVREALDNYRFDRAANALYEFIWHQFCDWY
LELTKPVLWHGSESEQRATRKTLIEVLETLLRLAHPIMPYITEEIWQRVAPLANRGGDSI
MLAAYPQADASLEDADAMADLEWVKRFIVSIRNLRTEMNLAPSKALSVLLRPAGDDARRA
HENEAFLKAMAKLDAITHLSSDEAAPTSTKQLIGETELLLPMAGLIDKEAELARLQKELD
KTHSEIKRLEGKLNNAGFVAKAPAAVVAIEQGKLEDYKAVLAKLVAQQEQIASL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatttaatcccacggctatcgaacaagccatgtaccagcaatgggaaaat
aagggctattttaagcctcatggcgataccagcaaacccgcttacagcattatgataccg
ccacccaacgtaaccggtagcttgcacatgggccatgcgtttcaagataccattatggat
accttgatccgctaccagcgcatgcaaggcaaaaacactttatggcaagtaggcaccgac
cacgccggcatcgccacgcaaatggtggtagagcgtaaaattgccgctgaagaagataaa
acacgccacgattacggtcgtgaggcctttatcgataaaatttgggattggaaaaaagag
tccggtggcactattactcagcagctgcgccgccttggtacttccgtagattgggagcgc
gagcgcttcactatggacgagggcttatcaaatgcagttaaagaagtgtttgtgcagctg
taccaagaagacttaatttatcgcggcaagcgcctagtgaactgggatcctaagcttaat
accgccatctcagacttagaagtagaaaaccgcgatgttaatggtcacatgtggcacttt
cgctacccgttggccgatggtgtcactaccagtgagggtaaaaactatttagtagtggct
accactcgtccagaaaccatgcttggtgacaccgccgtggcggtaaatcctaacgatccg
cgctaccaaagcctgattggtaaatttatcgacttaccattagtggctcgtcgtataccc
attgtcggcgatgagcatgcggacatggaaaaaggcacgggttgtgtgaaaattaccccc
gctcatgactttaatgatgcagaagtgggcaagcgccatcagttgccactgattaatatc
ctcactttagatgctcatgttcgtgagcaggcagaagtcttcaccactaaaggtgaagta
agcgatatctatagcgatgctttaccggcggagtttcagggtctggagcgttatgcagct
cgcaaagccatagtagcggcattagataagctaggcttactcgatagcgtaaaagatcat
gacttagtggtgccctatggcgatcgcggcggtgtgcccattgaacccatgcttaccgac
caatggtatgtacgcgccgcgccgcttgccgaagtggccactaaagcggtggaagacggt
gaaattgaatttgtacctaaacaatatgagaatatgtatttctcgtggatgcgtgatgtt
caagattggtgtatctcgcgccagctctggtggggccatcgtattcctgcttggtatgat
agcgagggtaaggtctatgtgggacgtgatgaagccgaggtgcgcgctaactatcaacta
gcaagcgatgtagtactcaaccaagacgaagatgtgcttgatacttggtttagctcggca
ctgtggaccttctctactcaaggctggcctgaaaaaacacccgacttagccacttttcat
cccagcagcgtgttagttaccggttttgatattattttcttctgggtagcgcgcatgatc
atgatgaccatgcactttattaaagatgaaaatggcaaaccgcaggtaccttttaaaacc
gtgtatgtcaccggtctgattcgtgatgaaaacggcgataagatgtcaaaatctaagggt
aacgtcttggatccgttagacatgattgacggtatcgaccttgagtcgttagtgaccaag
cggactggcaatatgatgcaaccccagcttgctgctaagattgaaaaagatacccgctct
accttcgccgaaggaattgaagcccacggtaccgatgcgctgcgctttacgctggccgcc
atggcgtcaacagggcgtgatattaactgggatatgcgccgtttagatggttatcggagt
ttttgtaataaactgtggaatgcctcgcgctacgtgttgatgagtaccgaagagcaagat
tgcggcactcatagcgaaggtaaaagcggcgagttaagctattctttggcggatcgctgg
atccaagcacagctgcaagtgaccattaccgaagtgcgagaagcgctcgataactatcgc
ttcgaccgagctgctaatgcgctgtatgagtttatctggcatcagttttgcgactggtat
ttagagctgacaaaaccggtgttgtggcatggttcagagtctgagcagcgtgccacacgc
aagaccttgatcgaagtgttagaaacactattgcgcttagcgcacccgattatgccctac
atcaccgaagaaatttggcagcgcgtggcgcccttggctaatcgcggtggcgacagtatt
atgctggccgcttatccacaggccgatgcctcactggaagatgccgatgctatggcagat
ttggagtgggtgaagcgctttatcgtatctattcgtaacttgcgcaccgagatgaactta
gcacccagcaaggcattatcggttctattgcgtcctgcgggtgatgatgcgcgccgtgct
catgagaatgaagctttcttaaaagccatggccaagcttgatgccattactcacttaagc
tctgatgaagccgcgcctacctccaccaagcagttaattggtgagacagaattgctatta
ccgatggcgggtcttatcgataaagaagcggagctggcgcggttgcaaaaagagctagat
aaaactcatagtgaaataaaacgccttgagggcaaactcaataacgccggctttgtggca
aaggcacccgcggcggtagtggcaattgaacaaggtaagctagaagattataaagcggtc
ttggctaagcttgtggctcagcaagaacagattgccagcttgtaa
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