Oceanisphaera avium: CBP12_12730
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Entry
CBP12_12730 CDS
T04855
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocm03016
]
CBP12_12730
Enzymes [BR:
ocm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CBP12_12730
Transfer RNA biogenesis [BR:
ocm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBP12_12730
Prokaryotic type
CBP12_12730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ART80913
UniProt:
A0A1Y0D019
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All DBs
Position
2758431..2759540
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AA seq
369 aa
AA seq
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MTEQDANISQEHSAHSESAAKIATPEWAYLHGEPSAYGGLKRTPEDFKVREDLGFAPCGE
GEHIFLNIRKRGQNTQWIARELARVAKVTQREVSWAGLKDRHAVTEQWFGVHLPGKAEPD
FSSLENSDVQILARARHNKKLKIGALKGNWFELVITDLSHTADLETRLNAIASRGVPNYY
GDQRFGHHFGNITHARAMFNGRKVKDRTKRSLYLSAARSYLFNLAASHRLSAGLGEQLLA
GDCLMLAGTQSFFTINEDNPLDATLQARFASDDVRLSAPLWGRSRLPSIETAAQLELSAL
AEHADLCQGLENQGLKQERRPLLLKPQQLTWQLAEDRLCLAFWLPAGSYATSVVRELVKD
GVGNEDISK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaagacgccaatatttctcaagaacactctgctcattctgagagtgccgct
aagatagcgacgcctgagtgggcgtatttacacggtgagcccagtgcttatggcggctta
aaaaggacgcctgaagattttaaagtgcgagaagacttaggctttgctccgtgcggcgaa
ggagagcatatttttttaaatatccgaaagcgtggacaaaatactcagtggatcgcacgc
gagctggcaagagtcgctaaggttacgcaacgagaagtgagttgggcgggcttaaaagat
agacacgcggtcactgagcagtggtttggcgtgcatttgcctggcaaggcggagccggat
ttttcgagtttagaaaatagcgatgtacaaatattagcgcgggctcgtcataacaaaaaa
ttaaaaatcggcgccctaaaaggcaattggtttgagttggtgatcacggacttatctcac
actgctgacttagaaacacgtttaaacgccattgccagtcgaggtgtgcctaactattat
ggcgaccagcgctttggtcatcactttggcaatattactcacgcacgcgccatgtttaat
gggcgcaaagtaaaagatcgcactaagcgctcactttatttatcggcggcgcgcagttat
ttatttaatttagccgctagccaccgtttaagtgcaggtttaggcgagcaattattagcg
ggcgattgcttaatgctggccggaactcaatcattttttaccattaatgaagacaacccc
cttgatgccaccttacaagcgcgttttgcgagtgacgatgtgcgcttaagtgcaccactt
tgggggcggagccgcttaccaagtatagagactgctgcacagctggagctcagtgcgctt
gctgaacacgctgatctttgccaaggattagaaaaccaaggactcaaacaagaacgtcgc
cctttattgctaaaacctcagcagcttacttggcagctagcagaggatcgcttgtgttta
gccttttggttgccagcaggcagttatgcaaccagtgtggtgcgtgagctggttaaagac
ggggtaggtaatgaagatattagtaagtaa
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