Oceanobacillus zhaokaii: CUC15_03195
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Entry
CUC15_03195 CDS
T05570
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
ocn
Oceanobacillus zhaokaii
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocn03021
]
CUC15_03195 (sigB)
Transcription machinery [BR:
ocn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CUC15_03195 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
RE_TdeIII
GerE
DUF134
TnsD
HNF-1_N
Sigma70_ECF
HTH_37
HTH_23
PhyR_sigma-like
ELMO_ARM
HTH_3
RPC3_helical
Motif
Other DBs
NCBI-ProteinID:
AXI08046
UniProt:
A0A345PDG6
LinkDB
All DBs
Position
614385..615176
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AA seq
263 aa
AA seq
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MTTKSQPHNKGRDEVYQWIEFLQKEPTDEVVQEKIVLTYKNLVESIARKYSRNSMIHEDL
VQVGMIGLLAAVRRYDATFGKSFESFAVPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIK
RAVDELTTANQKSPSIKEIAEYLEASEEEILETMEMSKSYKALSVDRKVEGDSDGGTVAI
LDIVGNTDDGYDNVDQKIILEKILPILSEREQEILKYTYFENLSQKETGEILGISQMHVS
RLQRRSLRKLREAIQSESTEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaaatctcaaccacacaataaaggaagagatgaggtttaccaatggattgaa
tttctacaaaaagagccgacagatgaagtggtgcaagaaaaaattgtgcttacatataaa
aatcttgtagaatcaattgctagaaaatactcaaggaatagtatgattcatgaagatcta
gtacaggtaggtatgattggattactagcagcagttagaagatatgatgccacatttggt
aaatcctttgaatcctttgctgttccaaccattataggagagataaaacgattcattcgc
gataagacttggagtgtacatgtaccaagacgtattaaagaattaggaccaaagataaaa
agggctgtagatgaattaacaactgcaaatcaaaagtctccctccattaaagaaatagca
gaatatctcgaagcatcagaagaggaaatcttagaaacaatggaaatgagtaaaagctat
aaagcactttccgttgatcgcaaggttgaaggagattcagacggtggtacggttgccata
ttggatattgtcggtaatactgacgatggttatgataacgtagatcaaaaaattattctt
gaaaagattctccctatcctttctgagcgcgaacaagaaatattaaaatatacatatttc
gaaaatctaagtcagaaggaaactggcgaaatccttggtatttcgcaaatgcatgtatcg
cgtctgcaacggcgttcattacgtaagcttagggaagcgattcagtctgagagcacggag
gttttcgattga
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