Oceanobacillus zhaokaii: CUC15_09015
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Entry
CUC15_09015 CDS
T05570
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ocn
Oceanobacillus zhaokaii
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocn03019
]
CUC15_09015
03009 Ribosome biogenesis [BR:
ocn03009
]
CUC15_09015
03036 Chromosome and associated proteins [BR:
ocn03036
]
CUC15_09015
Enzymes [BR:
ocn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CUC15_09015
Messenger RNA biogenesis [BR:
ocn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CUC15_09015
Ribosome biogenesis [BR:
ocn03009
]
Eukaryotic type
90S particles
RNase
CUC15_09015
Prokaryotic type
rRNA processing factors
CUC15_09015
Chromosome and associated proteins [BR:
ocn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CUC15_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Lzipper-MIP1
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AXI09052
UniProt:
A0A345PGC2
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All DBs
Position
1786659..1787351
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AA seq
230 aa
AA seq
DB search
MDVAQLEKKLKMTFNNHDLIKQAFTHSSYVNEHRHEVFSDNERLEFLGDAVLELGVSQYL
FRQNNDMPEGELTKLRAAIVCEPSLMNFAQDLDFGNFLLLGKGEEQTGGRERPAILADVF
ESFLGAVYLDQGFDQALQFLQNYVFPKISTGAFSHAMDYKSQLQELVQAVKNQVIEYKII
EERGPSHDKEFISQVLIGNELVGEGLGRTKKEAEQRAAKHALDKFSENDK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgcacaattagaaaaaaagttaaagatgacctttaataatcatgatttgatc
aaacaggcatttacacattcatcttatgttaatgagcatcggcacgaagttttttcggac
aatgaacgattggaatttctaggtgatgcagtactggaattaggtgtgtcacaatattta
tttcggcaaaataacgatatgcctgaaggggaactgaccaagttacgcgctgctattgtt
tgtgagccgtcactaatgaattttgctcaggatcttgattttgggaattttttattgctc
ggtaaaggagaagaacaaacaggcggcagagagcgtcctgctattttggcggatgttttt
gaatcgtttcttggcgctgtctatctagatcaaggctttgatcaagcattacagttttta
caaaactatgtttttccgaaaatatctacaggtgctttttcgcatgcgatggattataaa
agccagttacaggaattagtacaagcagtaaaaaaccaagtgattgaatataaaattatt
gaagaaagaggtccatcccatgataaagaatttatttcccaagtattaattggtaatgaa
ttagtgggagaaggactaggcagaactaagaaagaagcggaacaacgcgctgcaaagcat
gcgttagataaattcagtgagaatgataagtaa
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