Oceanobacillus zhaokaii: CUC15_09560
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Entry
CUC15_09560 CDS
T05570
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ocn
Oceanobacillus zhaokaii
Pathway
ocn02024
Quorum sensing
ocn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUC15_09560
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CUC15_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocn03019
]
CUC15_09560
03036 Chromosome and associated proteins [BR:
ocn03036
]
CUC15_09560
Messenger RNA biogenesis [BR:
ocn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CUC15_09560
Chromosome and associated proteins [BR:
ocn03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CUC15_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Oscp1
DUF5608
Motif
Other DBs
NCBI-ProteinID:
AXI09157
UniProt:
A0A345PGM7
LinkDB
All DBs
Position
1898910..1899134
Genome browser
AA seq
74 aa
AA seq
DB search
MAQTVNVQDQYLNQLRKHHISVTVFLTNGFQLRGTVKAFDNFTVLLETDGKQQLIFKHAI
STFAPVKNVSLENE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaactgtaaatgtccaagatcaatatttaaatcaattgagaaagcatcatatt
tcagttactgtattccttacaaatggtttccagttaagggggactgtgaaggcttttgat
aacttcacggtattgcttgaaaccgatggtaaacaacagcttatatttaaacatgctatt
tcaaccttcgctccagttaaaaatgtttcattagaaaatgaatag
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