KEGG   Oceanobacillus zhaokaii: CUC15_12340
Entry
CUC15_12340       CDS       T05570                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ocn  Oceanobacillus zhaokaii
Pathway
ocn03030  DNA replication
ocn03410  Base excision repair
ocn03420  Nucleotide excision repair
ocn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CUC15_12340
   03410 Base excision repair
    CUC15_12340
   03420 Nucleotide excision repair
    CUC15_12340
   03440 Homologous recombination
    CUC15_12340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocn03032]
    CUC15_12340
   03400 DNA repair and recombination proteins [BR:ocn03400]
    CUC15_12340
Enzymes [BR:ocn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CUC15_12340
DNA replication proteins [BR:ocn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CUC15_12340
DNA repair and recombination proteins [BR:ocn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CUC15_12340
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CUC15_12340
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 XPG_I HHH
Other DBs
NCBI-ProteinID: AXI09662
UniProt: A0A345PI32
LinkDB
Position
complement(2421342..2423978)
AA seq 878 aa
MTNKLVLMDGNSLIYRAFFALPLLNNDKGVYTNAVFGFTTMLLRMLEEEKPTHMLVAFDA
GKTTFRHSTYKEYKGGRQKTPSELSEQFPILKELLDAFGIKHYQLEQYEADDIIGTLSKQ
AKDNGLDVTVISGDKDMLQLVDDTVTVSVTKKGISEVEKYTPSYMLEKMEITPQQIIDLK
ALMGDSSDNIPGVPGVGEKTATKLLKQYETLEEVYAHLDEVSGKKLKENLETYKDDAFMS
KELVTINRDSPIEVTIEDSKYTEYQPSEVSGIFKELGFQSLLNKMTGEDGVEEETVGLDE
IDYTIVEEISADMFTGKEALVIEMLGENYHQAAIEGIGIVNEKTAYFIPTELAVKSKLFK
QWAEDASKEKYVFDAKKTLVALLRHDIHIKGITFDMLLASYLLNPSENNHDIPAISSRMG
KTMAKSDEAVYGKGAKQKVPEEAVLAEHIARKTNALFAIQPEMEELLEENEQADLLMDLE
MPLALILGEMESQGVLVDKSRLEEMGIDLKERLANLEAEIYNLAGEEFNLNSPKQLGPIL
FEKLGLRVIKKTKTGYSTAADVLEQLEQEHEIIPKILLYRQLGKLQSTYIDGLLKVVSKK
TSKIHTRYNQALTQTGRLSSVDPNLQNIPIRLEEGRKIRRAFVPSEKDWIMFAADYSQIE
LRVLAHIAKDEKLIAAFKSDLDIHTQTAMEVFHVEKDEVTSNMRRQAKAVNFGIVYGISD
YGLSQNLGITRKEAKSFIDRYFDIYPGVKQYMEDIVQDAKQHGYVKTIMKRRRYLPDITS
RNFNLRSFAERTAMNTPIQGSAADILKKAMLDLDAKLKEEKLQARMLLQVHDELILEAPK
EEIEKLKEVVPAMMENTVDLIVPLKVDYSYGDSWFDAK
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgacgaataaattagttttgatggacggaaacagtttaatttatcgtgcgttttttgca
ttaccacttttaaacaatgataaaggggtatacacgaatgcggttttcggatttacaaca
atgctgctgcgtatgctggaggaagaaaaaccgacacatatgctcgtagcatttgatgca
gggaaaacgacatttcgtcactcaacatataaggaatataaaggtggcagacagaagacg
ccttcagaactttcagagcagtttccaattttaaaggaattgcttgatgcatttggaatt
aagcattatcagctcgagcaatacgaagcggatgatattattggtactctatcaaagcaa
gcaaaggataatggccttgatgtaacggttatatctggggacaaggatatgcttcagctc
gtggatgatacggtaacggttagtgttacgaaaaaaggaattagcgaagttgagaaatat
acgccaagctatatgctggaaaaaatggaaattacaccacaacaaatcattgatttaaaa
gcattaatgggcgatagctccgataatatcccaggtgttccaggtgtcggtgaaaagaca
gcgaccaaactattaaaacagtacgaaacattagaagaagtatatgcacatctggacgag
gttagcggtaagaagctgaaggaaaatcttgaaacctacaaagatgatgcatttatgagt
aaggagctcgtgacgattaatcgtgattcaccaattgaggtaacgattgaggattcgaag
tatacagaatatcaaccgagtgaggttagcgggatttttaaagagctgggattccagtcg
ttactaaataaaatgactggtgaagatggcgtggaagaagaaacggttggattagatgaa
atagattatacgatcgttgaggaaatcagtgcagatatgttcactggtaaagaggcactt
gtaattgagatgctcggtgagaactatcatcaagcggcgattgaaggtattggtattgtt
aacgaaaagacagcttactttataccgacagagcttgcagtaaagtcgaaactctttaag
caatgggccgaggacgcaagcaaggagaaatatgtttttgatgctaagaaaacccttgtc
gctttattacgccacgatatccatattaaaggaatcacatttgatatgttgcttgcatca
tacttgttaaacccgtcagaaaataaccatgatatcccggcgatatcgtctcgaatgggt
aaaactatggcaaaatccgatgaagcagtttatggtaaaggtgcgaaacagaaggttccg
gaagaagcggtattagctgagcatattgcaaggaagacgaatgcactctttgcgatacaa
ccagaaatggaagagcttcttgaagaaaatgaacaagcagatttattaatggatttggaa
atgccactcgcacttattttaggtgaaatggaatcccaaggtgtattagtagataaaagt
cgcttagaggaaatgggaattgatttgaaagaacgattagcaaatctcgaagcagaaatt
tataatctggctggtgaggaatttaatttaaattcaccgaaacagctcggaccaatttta
tttgaaaaattaggacttcgggttattaagaagacgaagaccggatactcaacagctgct
gatgtgctcgaacaattagagcaagaacatgaaatcattccaaagattttattgtatcgt
caattagggaagcttcaatcaacctatattgatggtttgttaaaagttgtgagcaagaaa
actagcaaaattcatacacgttataatcaggcgctaacacagacaggtagactaagctcc
gttgatccgaacctgcaaaacatcccaattcgcttggaagaaggtagaaaaatccgtcgt
gcatttgtaccatcagagaaggattggatcatgtttgccgccgattattcgcaaattgaa
ttgcgtgtgcttgcccatattgcgaaggacgagaaactaattgcggcatttaagagtgat
ctagatattcatacgcaaacagcgatggaagtttttcatgtagaaaaagacgaagtaaca
tcaaatatgagacgtcaggcaaaggccgttaactttggtattgtctatggaatcagtgat
tatggtctctcacaaaacctcgggattacacgaaaagaagcgaaaagctttatcgatcgc
tattttgatatctatccaggtgtgaagcaatacatggaagatattgtccaggatgcgaaa
cagcatggctatgtgaaaacaattatgaaacgacgtcgttacctgccagatattacgagt
agaaactttaacttaagaagttttgcagaacgaacggcaatgaacacgccaatccaaggt
agtgcagcagatatacttaaaaaagcaatgctcgatttggatgcaaaattaaaagaggag
aagctgcaagcaagaatgctgcttcaggtacatgatgaattgattttagaagcacctaag
gaagaaatcgagaaattaaaagaagtagtcccagcgatgatggagaacaccgtcgattta
atcgttccgcttaaagtcgattattcatacggagatagctggtttgatgcaaaataa

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