Afipia carboxidovorans OM4: OCA4_c01000
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Entry
OCA4_c01000 CDS
T01967
Name
(GenBank) ABC transporter oligopeptide/dipeptide ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA4_c01000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c01000
Transporters [BR:
oco02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
OCA4_c01000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_16
AAA_29
Mg_chelatase
AAA_33
DUF87
nSTAND1
nSTAND3
NACHT
RsgA_GTPase
AAA_25
ATPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEI01258
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Position
112496..114379
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AA seq
627 aa
AA seq
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MTMTPGRPLLEVRNLSVTLPVGSGKLYAVRDVNFTLERGEALGVVGESGSGKSMTSLALM
NLLPRNAIRQADMLRLGEHDLLAMDGQEFSRTLAGKRMAMIFQEPMTSLNPVYTIGQQIM
EMIVPDATQSAKDIRDRAVYLLERIGIPDAAGRLKQYPHELSGGLRQRVMIAMMLMNKPD
LLIADEPTTALDVTVQASILKLLMELRKELGMALILVSHDLGVVSQSMDKIAVMYAGELV
ETGPVADVLGAPQHPYTQGLLASIPAARHSGERLPSIPGSVPALFAQPAGCVFASRCPQV
QPECRTTRPPTQARGADHHYRCILTPGRSHTALRRPQAVQMSAAPASSNALLSARGVSCT
FTIRSGLLARGKSLTAVDNVSLDIAEGEIVALVGESGSGKSTFARILLGLQQPDQGEVLI
AGTPVQSVPPFERAKLVQPVFQDPYSSLNPRKTIGQSIGRPLELHGTASATERRKIVEET
MELVGLPKRLFNNYPSQLSGGQRQRVAIARAIILKPKLLICDEPTSALDVSVQAQILNLL
LDLRDELGLSYLLITHDLAVVDCVATRIAVMHRGRIVELGTKDEVLSAPRDPYTRTLLGS
VLKVEIPALQARADAGARAPDPIHLLR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacacccggtcggccgctgcttgaagtccgcaacctctccgtcactttgcca
gtcggttcgggcaagctctatgccgtgcgcgatgtgaacttcacgctggagcgcggagag
gcgcttggcgtggtcggcgaatccggcagcggcaagtcgatgacgtcattggcgctgatg
aacctgctgccgcgcaacgcgatccgccaagcagacatgctgcggctcggcgagcacgat
ctccttgccatggacggccaggagttctcgcgcacgctggccggcaagcggatggcgatg
atctttcaggagccgatgacctcgctcaacccggtctacaccatcggccagcagatcatg
gaaatgatcgtgccggatgcaacgcagagtgcaaaggacatccgcgaccgcgccgtctat
ctgctggagcggatcggcatccccgacgcggcgggccggctgaagcaatacccgcatgaa
ctgtccggcggcctgcgccagcgcgtgatgatcgcgatgatgctgatgaacaagccggac
ctgttgatcgccgacgagccgaccaccgcgctcgacgtcacggtgcaggccagcatcctg
aagctgctgatggagctgcgcaaagaactcggcatggcgctcattctggtgagccacgac
ctcggcgtcgtgtcgcagagcatggacaagatcgcggtgatgtacgcgggcgaactggtc
gagaccggacccgttgccgatgtgctcggcgcgccgcagcacccttacacgcaggggctt
ctcgcctcgatcccggcggcacgtcattccggcgagcggctgccgagcattcccggctcg
gtaccggcgctgttcgcgcagcctgcgggctgcgtgttcgcttcacgctgtccgcaggtg
caaccggagtgccgcaccacccggccgccgacgcaggcgcgcggtgcggatcatcactat
cgctgcatcctgacaccgggccgcagccacacggcgttgcgcaggccgcaggccgtgcag
atgagcgcggctcccgcgtcttccaatgcgcttctctccgcacgcggcgtgagctgcacg
ttcacgatccgcagcgggctgcttgcgcgcggcaaaagcctcaccgcagtcgacaacgtc
tcgcttgatatcgcggaaggtgagatcgtcgcgctggtcggcgaatccggaagcggcaag
agcacgttcgcgcggattctgctgggcctgcagcagcccgaccaaggcgaggtgctgatc
gcgggcacgccggtgcaatccgtgccgccgttcgagcgcgccaagctggtgcagccagtg
tttcaggacccgtattcatcgctcaacccgcgcaagaccatcggccagagcatcggccgt
ccgctcgaattgcacggcaccgcttcggcaaccgaacggcgcaagatcgtcgaggagacg
atggagctcgtcggcctgccgaaacgactgttcaacaattatccctcgcagctttccggc
gggcagcgccagcgcgtcgccatcgcacgcgcgatcattctcaagccaaaacttctgatc
tgcgacgagccgacgtcggcgctcgacgtatccgtgcaggcgcagattctcaatctgctg
ctcgacctgcgcgacgaactcgggctgtcctatctgctcattacgcatgatcttgcagtc
gtcgattgcgtcgcgacgcggatcgcggtgatgcatcgcggccggatcgtcgagcttggc
accaaggacgaggtgctttccgcgccgcgcgatccttacacgcgcacgctgctcggctcc
gtcctgaaagtcgaaatacccgctttgcaagcccgcgccgatgccggtgcgcgcgccccc
gaccccattcatctgttgcgttaa
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