Afipia carboxidovorans OM4: OCA4_c01580
Help
Entry
OCA4_c01580 CDS
T01967
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oco03016
]
OCA4_c01580
Transfer RNA biogenesis [BR:
oco03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
OCA4_c01580
Prokaryotic type
Methyltransferases
OCA4_c01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
GTP_EFTU
AAA_18
HflX_C
ABC_tran
RsgA_GTPase
AAA_16
Arf
TniB
GBP
Lambda_CIII
AAA_22
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEI01316
LinkDB
All DBs
Position
169648..170976
Genome browser
AA seq
442 aa
AA seq
DB search
MPLQPPTIYALASGRPPAAIAIVRVSGPQVPQVLERLCGRLPQPRTATLVTLTSPGTGPI
DQAVALWFPAPHSATGEDVAEFQLHGGRAVIAALFAALEKIDGLRPAEPGEFTRRAFENG
KLDLTEAEGLDDLIHADTDRQRRQALRHLQGLLGHRAESWRAQIIEAMALIEAGIDFSDE
GDVSTELMAPALARVASLRTEIEETLAASAQSERLREGLQVAIAGPPNAGKSTLLNRLAR
REAAIVSPHAGTTRDIIEVHLDLDGYPVTLIDTAGLRDASDPVEQEGVRRARARAEAADL
VLWLDEAESNATPLAGEVPLWRVRNKIDLAGKVGASTGGSDPAFAISAVTGEGVDQLVAA
LVGFASDYFGGGEAALVSRARHRVLLTETVAALKRAEDRAGQGDEIVAEELRIAIHAVGR
LLGRVDVEEILDSIFREFCIGK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgcaaccaccaaccatttacgcactcgcctccggccggccgcccgcggcgatc
gcgattgtgcgcgtctccgggccgcaggtgcctcaggtgctggagcggttgtgcggccgc
ctgccccagccccgaactgcgacgctcgtgacgctgacctcgccgggcaccggaccgatc
gaccaagccgtcgcgttgtggtttcccgcgccccatagcgcgaccggcgaagacgtcgcc
gaattccagcttcatggcggccgcgcggtgatcgcggcactgttcgccgctctggaaaaa
atcgatggcctgcgcccggccgagcccggcgaattcacccgccgcgcattcgagaacggc
aagctcgacctcacggaagccgaaggtctcgatgacctcattcatgccgacaccgatcgc
cagcggcgccaggcgctgcgtcatctgcaggggctgcttggtcatcgcgccgagagttgg
cgcgcgcagatcatcgaggcgatggcgctgattgaagcgggtatcgatttttccgacgag
ggcgatgtctcgacggagttgatggcgccggcgcttgcgcgcgttgcttctctcagaacg
gaaatcgaagaaacccttgcggcatcggcacaaagtgaacgcctgcgcgagggcctgcag
gttgcgatcgcagggccaccgaatgcaggcaagtcgacactcctcaatcgtcttgcgcga
cgtgaggctgcgatcgtctcgccgcatgccggcaccacgcgcgacatcatcgaagtgcat
ctcgatctcgatggctatccggtgacgctgatcgacactgccgggctgcgtgatgcgagc
gatccggtcgagcaggaaggcgtgcgccgggcacgggcgcgggcggaggccgcggatctc
gtgctgtggctggatgaggcggaaagcaacgcgacgccgctcgctggcgaagtgccgctc
tggcgcgtacgcaacaagatcgaccttgccgggaaggttggtgcgtcaacgggcggaagc
gatccggcatttgcgatctcggccgtgaccggggagggcgtcgaccagttggtggcggct
cttgtcggatttgcgtcggactatttcgggggcggggaggcggcactggtcagccgcgcc
cggcatcgcgtgttgctgaccgagaccgttgcggcgttgaagcgggccgaggatcgggcc
gggcagggcgatgaaatcgtcgctgaggagcttcgaatcgcgattcatgctgttggaagg
ctccttgggcgggtcgacgttgaagagattctggattcgatctttcgagagttctgtatt
ggtaaatga
DBGET
integrated database retrieval system