Afipia carboxidovorans OM4: OCA4_c01640
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Entry
OCA4_c01640 CDS
T01967
Name
(GenBank) putative DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03030
DNA replication
oco03430
Mismatch repair
oco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCA4_c01640
03430 Mismatch repair
OCA4_c01640
03440 Homologous recombination
OCA4_c01640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oco03032
]
OCA4_c01640
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c01640
Enzymes [BR:
oco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCA4_c01640
DNA replication proteins [BR:
oco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCA4_c01640
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCA4_c01640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AEI01322
LinkDB
All DBs
Position
complement(177671..178699)
Genome browser
AA seq
342 aa
AA seq
DB search
MTALRGKEIDTFLARPDPARPVILLYGPDTGLVRERADALLSSAVADPNDPFSMVKMDGD
ELAGDPARLVDEAMTVPLFGGRRAIRIRAGSRNFASAIDTLAGMAPKDCMIVIEAGELRP
DAPLRKACERSRSAVAIACYTDTERDLARLIDEELRANGTTIAADARAALTGLLGGDRQA
SRNEIRKLALYTHGAKEVTLADVAAVVTDASALALDPIIDGAFAGRAAAVETAYAKALAA
GTYPGQIIASAQRHAAQLHKARLALEEGRSEMDALESGFPRLHFSRRTHVETALRGLSSE
RLLRIISLLAEAAFDMRRQADLAGTIGGRALMSIAVNARARR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcactccgcggcaaagagatcgacaccttcctcgcccggcccgaccccgcgcgc
ccggtgatcctgctctacgggcctgatacgggcctcgtgcgtgaacgcgccgacgcgctg
ctttcttccgccgtcgcggacccaaacgatccgttttcgatggtgaagatggatggcgac
gagcttgccggcgatccggcgcgccttgtcgacgaggcgatgacggtgccgctgttcggc
ggccggcgggcgatccgcatccgcgccggttcgcgcaatttcgcgagcgccatcgatacg
cttgccgggatggcgccgaaagactgcatgatcgtgatcgaggcgggggaattgcgtccc
gacgcgccgttgcgcaaggcgtgcgagcgctcacgcagcgcagtcgccatcgcctgctac
accgataccgagcgcgatctggcgcgcctgatcgacgaggagttgcgtgcgaacggcacc
accatcgccgctgacgcgcgcgccgcgctgaccggccttctcggtggcgaccgccaggcc
tcgcgcaacgagatccgcaagctcgcgctctacacccatggcgcaaaggaagtgacgctg
gccgacgtcgcggccgtcgtcaccgatgcctcggcgctcgcgctcgatccaatcatcgac
ggcgcgttcgccgggcgcgcggcggcggttgagacggcctacgccaaggcgctcgcggcc
ggcacctatcccggccaaatcatcgcctcggcccagcgccatgccgcacaactccacaag
gcccgcctcgcactggaagagggccgcagcgaaatggacgcgctggaaagcggctttccg
cggctgcacttctcccgccgcacccatgtcgagaccgcgctccggggcctgtcctccgag
cggctgttacggatcatctccctgctggcggaggcagcgttcgacatgcgccggcaggcc
gacctcgccggcaccatcggcggccgcgcgttgatgtcgatcgcggtcaacgcccgggcg
cgccgttaa
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